Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30845
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   1.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   1.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.0  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 62  PADFYHVHHHQNHI 21
           P D  HVHHHQ  +
Sbjct: 128 PTDNSHVHHHQTSL 141


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 380 WFDEIVVTRKREEISNLLKSLMNKYNP 460
           W D   V RK +EIS L KS++   +P
Sbjct: 231 WTDVSNVKRKSKEISKLPKSMLAISDP 257


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 380 WFDEIVVTRKREEISNLLKSLMNKYNP 460
           W D   V RK +EIS L KS++   +P
Sbjct: 231 WTDVSNVKRKSKEISKLPKSMLAISDP 257


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 506 GKLIESEDNEECLEGERGNQNSIKKSEK 589
           GKL   E N+E  +G+ G    I+K +K
Sbjct: 129 GKLSSFESNDETKDGKVGLYERIQKLKK 156


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 383 FDEIVVTRKREEISNLLKSLMNKYNPDSHL 472
           F ++ +T K      ++ + ++KY P  HL
Sbjct: 129 FAKVKLTNKSNGNGQIMLNSLHKYKPTVHL 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,067
Number of Sequences: 336
Number of extensions: 3348
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)