Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30845
         (756 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_48563| Best HMM Match : No HMM Matches (HMM E-Value=.)              51   9e-07
SB_19875| Best HMM Match : zf-ZPR1 (HMM E-Value=1.7)                   33   0.33 
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.33 
SB_26560| Best HMM Match : 7tm_1 (HMM E-Value=6.3e-09)                 29   4.1  
SB_47643| Best HMM Match : Peptidase_C48 (HMM E-Value=1.5e-05)         29   5.4  
SB_44896| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.4  
SB_6866| Best HMM Match : Peptidase_C48 (HMM E-Value=0.045)            28   7.1  
SB_41291| Best HMM Match : Piwi (HMM E-Value=0)                        28   7.1  
SB_35175| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_57117| Best HMM Match : Peptidase_C48 (HMM E-Value=8.4e-05)         28   9.4  
SB_51235| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00046)         28   9.4  
SB_5912| Best HMM Match : 7tm_1 (HMM E-Value=7.3e-08)                  28   9.4  

>SB_48563| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 53

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
 Frame = +2

Query: 185 YLTCEYHVKVSPLKI--FNKDNIKGSCLKIPQQNNFTDCGLYLLQYVEQFFK 334
           YL  E++ K S  K   F+K+  KG   K+P+Q+N  DCG++LLQYVE FF+
Sbjct: 2   YLMHEWNHKKSEGKKRDFSKETFKGGFPKVPEQDNHCDCGVFLLQYVESFFE 53


>SB_19875| Best HMM Match : zf-ZPR1 (HMM E-Value=1.7)
          Length = 323

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = +2

Query: 413 EEISNLLKSLMNKYNPDSHLTLPDITFPTLNGKLIESEDNEECL---EGER-GNQNSIKK 580
           EE++NL + ++   N D   T  D+   T+N   IE+   E+ L     ER   QNS+ K
Sbjct: 127 EEVANLHRQVLQSDNGDDVFTEEDVEEQTVNAGKIETTIREKILALEAAERTSRQNSVAK 186

Query: 581 SEKDLETATLTFVKQIPSE 637
             K      +  V+ + SE
Sbjct: 187 KIKRAHINEMMKVRGVTSE 205


>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1805

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
 Frame = +2

Query: 503  NGKLIESEDNEECLEGERGNQNSIKKSEKDLETATLTFVKQIPSELVKRSFGDPS----D 670
            N K IE    E  LE  + N+NS++KS+KDLE  T +   ++ +   ++  GD      +
Sbjct: 1126 NSKQIEELTIE--LESTKKNKNSLEKSKKDLENETSSLTIELKAISQEKQEGDRKIKMLE 1183

Query: 671  GTIVRKTIRIASD 709
              +    IR+A D
Sbjct: 1184 NQMSEANIRLADD 1196


>SB_26560| Best HMM Match : 7tm_1 (HMM E-Value=6.3e-09)
          Length = 556

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +2

Query: 542 LEGERGNQNSIKKSEKDLETATLTFVKQIPSELVKRSFGDPSDGT 676
           L  E+ +QN++KKS++  E    T  K+I  + +  +FG+ SDG+
Sbjct: 12  LSNEKAHQNTVKKSKQKQEKDEETRKKKI--KTIGLNFGNLSDGS 54


>SB_47643| Best HMM Match : Peptidase_C48 (HMM E-Value=1.5e-05)
          Length = 504

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = +2

Query: 110 KQPCILIFDSLAGASRSRVVATLRDYLTCEYHV-KVSPLKIFNKDNIKGSCLKIPQQNNF 286
           K+  I   DSLAG   S +  T    +   +HV K +   +    N  G    +PQ+ N 
Sbjct: 202 KEKSIFALDSLAG---SFIKPTAEAAMCKMWHVLKKADSSLDIASNKPGD---LPQKANG 255

Query: 287 TDCGLYLLQY 316
            DCG++LL Y
Sbjct: 256 IDCGVFLLMY 265


>SB_44896| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 124

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -2

Query: 101 HFYYNTVEVPFC-SPADFYHVHHHQNH 24
           H++++ V+ P+C SP D ++ H   +H
Sbjct: 31  HYFHSPVDQPYCHSPVDHHYFHSPMDH 57



 Score = 28.7 bits (61), Expect = 5.4
 Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -2

Query: 101 HFYYNTVEVPFC-SPADFYHVHHHQNH 24
           H++++ V+ P+C SP D ++ H   +H
Sbjct: 58  HYFHSPVDQPYCHSPVDHHYFHSTMDH 84


>SB_6866| Best HMM Match : Peptidase_C48 (HMM E-Value=0.045)
          Length = 1050

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 233 NKDNIKGSCLKIPQQNNFTDCGLYLLQYVEQFFK 334
           N  NI  + + + QQ   T+CGL+ + Y+    K
Sbjct: 237 NSPNISINVIPVQQQTKPTECGLFAVAYMTSILK 270


>SB_41291| Best HMM Match : Piwi (HMM E-Value=0)
          Length = 598

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -1

Query: 363 IGSV*SVIGSL-KNCSTYCSRYRPQS 289
           I S+ +V+ SL +N S YC+R RPQ+
Sbjct: 273 IPSIAAVVASLDRNASRYCARVRPQT 298


>SB_35175| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 371

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +2

Query: 47  DKSPLENKMEPQQCCSKNEPIKQPCILIFDSLAGASRSRVVATLRDYLTCEYHVKVSPL- 223
           D+  L+   + Q+C + N     P  +   S  G SRSR+      Y   + ++K   L 
Sbjct: 134 DRDMLKLMKQVQRCYAVNRRADHPVQMYLTSFEGKSRSRLDHIGCHYDRWDVNIKSEHLT 193

Query: 224 KIFNKDNI 247
           K+F K++I
Sbjct: 194 KVFPKEDI 201


>SB_57117| Best HMM Match : Peptidase_C48 (HMM E-Value=8.4e-05)
          Length = 524

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 266 IPQQNNFTDCGLYLLQY 316
           +PQQ N  DCG++LL Y
Sbjct: 485 LPQQANGIDCGVFLLMY 501


>SB_51235| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00046)
          Length = 534

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
 Frame = +2

Query: 104 PIKQPCILIFDSLAG--ASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLKIPQQ 277
           P+K   I+  DSLAG  A  S + A  +  L    +  + P +     N   S   IPQQ
Sbjct: 369 PLKHT-IIALDSLAGYKAKPSAISAVHKWSLLTTNNDALDPQQWKFCSN---SPQDIPQQ 424

Query: 278 NNFTDCGLYLLQYVEQFFKD 337
            N  DCG+++  Y      D
Sbjct: 425 GNSYDCGVFVCMYARSLVYD 444


>SB_5912| Best HMM Match : 7tm_1 (HMM E-Value=7.3e-08)
          Length = 337

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 48  IKVRWRTKWNLNSVVVKMNQSNNP 119
           +   W+  WN+ + V+ +N S NP
Sbjct: 254 VSPEWKLAWNITTTVIYINSSMNP 277


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,609,184
Number of Sequences: 59808
Number of extensions: 359602
Number of successful extensions: 1156
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)