Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30845
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043699-2|AAB97567.1| 311|Caenorhabditis elegans Ubiquitin-lik... 38 0.010
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr... 35 0.054
AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical ... 35 0.072
U55855-3|AAA98019.2| 893|Caenorhabditis elegans Ubiquitin-like ... 34 0.13
Z48045-3|CAA88104.1| 342|Caenorhabditis elegans Hypothetical pr... 31 0.88
U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like ... 31 1.2
AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to SU... 31 1.2
Z78198-11|CAH04700.1| 579|Caenorhabditis elegans Hypothetical p... 29 2.7
Z78198-10|CAB01568.1| 569|Caenorhabditis elegans Hypothetical p... 29 2.7
AF083654-1|AAC32865.1| 569|Caenorhabditis elegans putative pota... 29 2.7
Z74038-6|CAA98496.1| 423|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF273803-1|AAG15152.1| 433|Caenorhabditis elegans nuclear recep... 28 6.2
Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical pr... 28 8.2
AL132902-9|CAC14424.1| 455|Caenorhabditis elegans Hypothetical ... 28 8.2
>AF043699-2|AAB97567.1| 311|Caenorhabditis elegans Ubiquitin-like
protease protein 5 protein.
Length = 311
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 257 CLKIPQQNNFTDCGLYLLQYVEQFFKDPITDYTLPIKQLTN 379
C K+PQQ N DCG++++ + E F K +LP L +
Sbjct: 242 CQKLPQQKNSVDCGIFMMAFAEYFTKYNTAWQSLPTDALAD 282
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 35.1 bits (77), Expect = 0.054
Identities = 15/42 (35%), Positives = 29/42 (69%)
Frame = +2
Query: 503 NGKLIESEDNEECLEGERGNQNSIKKSEKDLETATLTFVKQI 628
+G++IE E+ + +E E ++S K+SEK++E+ + FVK +
Sbjct: 607 DGEVIEEEEKPKEVEAEDKKKSSKKQSEKEIESGSTLFVKNL 648
>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 209 KVSPLKIFNKDNIKGSCLKIPQQNN-FTDCGLYLLQYVEQFFKDPITDYTLP 361
K SPLK N + GSC+++ QN+ F+ Y +QY Q + T+ T+P
Sbjct: 229 KPSPLKEVNINQNAGSCVEVSWQNDEFSGADFYTIQYSLQSTPNNSTNMTIP 280
>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 209 KVSPLKIFNKDNIKGSCLKIPQQNN-FTDCGLYLLQYVEQFFKDPITDYTLP 361
K SPLK N + GSC+++ QN+ F+ Y +QY Q + T+ T+P
Sbjct: 229 KPSPLKEVNINQNAGSCVEVSWQNDEFSGADFYTIQYSLQSTPNNSTNMTIP 280
>AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical
protein B0348.5 protein.
Length = 254
Score = 34.7 bits (76), Expect = 0.072
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -1
Query: 390 SSNQLVNCFIGSV*SVIGSLKNCSTYCSRYRP 295
+SN L+N F G+ S I SL+ +TY SRY P
Sbjct: 96 ASNDLMNSFNGATNSAIPSLRELATYASRYGP 127
>U55855-3|AAA98019.2| 893|Caenorhabditis elegans Ubiquitin-like
protease protein 2 protein.
Length = 893
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +2
Query: 269 PQQNNFTDCGLYLLQYVEQFF---KDPITDYTLPIKQLTNWFDEI--VVTRKREEISNLL 433
P Q+NF DCGLY+L ++E F P+ P + +F E + R+++ NL+
Sbjct: 735 PIQDNFYDCGLYVLHFIEGLFCYPNRPVNVNDFPNFDWSKFFPEANKMCDLMRDKVYNLI 794
Query: 434 KSLMNK 451
+K
Sbjct: 795 LQQADK 800
>Z48045-3|CAA88104.1| 342|Caenorhabditis elegans Hypothetical
protein C41C4.6 protein.
Length = 342
Score = 31.1 bits (67), Expect = 0.88
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 263 KIPQQNNFTDCGLYLLQYVEQFFKDPITD 349
++PQQ N DCG+++ ++ +F P D
Sbjct: 299 RMPQQTNNFDCGIFIAEFARRFLLSPPKD 327
>U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like
protease protein 1 protein.
Length = 697
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +2
Query: 122 ILIFDSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLKIPQQNNFTDCGL 301
I +DSL + + V+ LR YL E K F+ I+ IP+Q N +DCG+
Sbjct: 598 IEFYDSLYDGNTA-VLPALRGYLEAESLDKKKTAMNFSGWTIQ-QMTDIPRQQNGSDCGV 655
Query: 302 YLLQYVE 322
+ Q+ E
Sbjct: 656 FSCQFGE 662
>AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to
SUMO-1-specific protease protein.
Length = 697
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +2
Query: 122 ILIFDSLAGASRSRVVATLRDYLTCEYHVKVSPLKIFNKDNIKGSCLKIPQQNNFTDCGL 301
I +DSL + + V+ LR YL E K F+ I+ IP+Q N +DCG+
Sbjct: 598 IEFYDSLYDGNTA-VLPALRGYLEAESLDKKKTAMNFSGWTIQ-QMTDIPRQQNGSDCGV 655
Query: 302 YLLQYVE 322
+ Q+ E
Sbjct: 656 FSCQFGE 662
>Z78198-11|CAH04700.1| 579|Caenorhabditis elegans Hypothetical
protein F55C5.3b protein.
Length = 579
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = +2
Query: 386 DEIVVTRKREEISNLLKSLMNKYNPDSHLTLPDITFPTLNGKLIESEDNEECLEGERGNQ 565
D+ +V + + + K MN+ + +LP N K ++ D + +E E +
Sbjct: 8 DDKIVAGRSKSADSKWKDRMNRGLGNMSKSLPSFNKNAANAKSDKTSDTKVVIEDESKKK 67
Query: 566 NSIKKSEKDLETATL 610
KK +K+L+ L
Sbjct: 68 KKKKKKDKNLDVEEL 82
>Z78198-10|CAB01568.1| 569|Caenorhabditis elegans Hypothetical
protein F55C5.3a protein.
Length = 569
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = +2
Query: 386 DEIVVTRKREEISNLLKSLMNKYNPDSHLTLPDITFPTLNGKLIESEDNEECLEGERGNQ 565
D+ +V + + + K MN+ + +LP N K ++ D + +E E +
Sbjct: 8 DDKIVAGRSKSADSKWKDRMNRGLGNMSKSLPSFNKNAANAKSDKTSDTKVVIEDESKKK 67
Query: 566 NSIKKSEKDLETATL 610
KK +K+L+ L
Sbjct: 68 KKKKKKDKNLDVEEL 82
>AF083654-1|AAC32865.1| 569|Caenorhabditis elegans putative
potassium channel subunitn2P24 protein.
Length = 569
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = +2
Query: 386 DEIVVTRKREEISNLLKSLMNKYNPDSHLTLPDITFPTLNGKLIESEDNEECLEGERGNQ 565
D+ +V + + + K MN+ + +LP N K ++ D + +E E +
Sbjct: 8 DDKIVAGRSKSADSKWKDRMNRGLGNMSKSLPSFNKNAANAKSDKTSDTKVVIEDESKKK 67
Query: 566 NSIKKSEKDLETATL 610
KK +K+L+ L
Sbjct: 68 KKKKKKDKNLDVEEL 82
>Z74038-6|CAA98496.1| 423|Caenorhabditis elegans Hypothetical
protein F58B4.5 protein.
Length = 423
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = -1
Query: 747 SSGFICTNDLFSISLAILIVFRTIVPSEGSPKLRFTNSLGICLTNVNVAVSRSFSDFLME 568
SS F+CT D ++L +I F+T+ S +P CL+ + R +DFL+E
Sbjct: 279 SSNFLCTRDGEKVTLKAIIDFQTV--SITTPAQDVGRLFASCLSTKD---RREKADFLLE 333
Query: 567 FWF 559
++
Sbjct: 334 EYY 336
>AF273803-1|AAG15152.1| 433|Caenorhabditis elegans nuclear receptor
NHR-56 protein.
Length = 433
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 560 FLFHLLNILHYPQTLLIYHL 501
F FH+L +LH+ +LI HL
Sbjct: 2 FFFHILRVLHFGNHVLIIHL 21
>Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical
protein T23G4.3 protein.
Length = 485
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 518 ESEDNEECLEGERGNQNSIKKSEKDLETATLTFVKQIPSELVKRSFGDP 664
ES+ + +C EG K+ EK+L+ + F+K SE K + DP
Sbjct: 72 ESDSSSDCTEGAEATPEQWKELEKELD-KVVAFMKD--SEAAKATETDP 117
>AL132902-9|CAC14424.1| 455|Caenorhabditis elegans Hypothetical
protein Y71A12B.10 protein.
Length = 455
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 729 TNDLFSISLAILIVFRTIVPSEGSPKLRFTNSLGICLTNV 610
TNDL I L + + +R +PS+ + L++ N G +T V
Sbjct: 273 TNDLTLIDLVLNVQWRLALPSDANFVLKYKNKQGDLVTLV 312
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,119,554
Number of Sequences: 27780
Number of extensions: 297074
Number of successful extensions: 971
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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