Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30845
         (756 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.1  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   4.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   7.1  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 56  DFYHVHHHQNHIAYLSH 6
           D +HVHH  NH A L H
Sbjct: 277 DNHHVHH-ANHHAILGH 292


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/42 (21%), Positives = 23/42 (54%)
 Frame = -1

Query: 720 LFSISLAILIVFRTIVPSEGSPKLRFTNSLGICLTNVNVAVS 595
           L S+++ ++ +  ++ P+E +P +     + ICL     A++
Sbjct: 252 LLSMTVFLMTIRESLPPTEKTPLISLYYGVSICLVTFASALA 293


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/51 (21%), Positives = 22/51 (43%)
 Frame = +2

Query: 284 FTDCGLYLLQYVEQFFKDPITDYTLPIKQLTNWFDEIVVTRKREEISNLLK 436
           F+  G Y L  +   +KD    Y    K+   W   ++    R++I  +++
Sbjct: 68  FSCIGYYKLNKIHDAYKDLNQRYGALCKEEALWNFPMISVFSRQDIETIIR 118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,459
Number of Sequences: 438
Number of extensions: 4008
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)