Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30843
(714 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 38 1e-04
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 27 0.23
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 24 1.6
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 24 1.6
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 24 1.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.9
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 6.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 6.6
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 6.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 6.6
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 8.8
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 37.5 bits (83), Expect = 1e-04
Identities = 28/122 (22%), Positives = 55/122 (45%)
Frame = +3
Query: 123 RDLEEANIQHEATLANLRKKHNDAVSEMGEQLDQLNKLKAKAEKERAQYFSEVNDLRAGL 302
+ L + +I L + ++H+ + + +Q Q + + + +ER YFS + D +
Sbjct: 75 QQLLQQHILSPTQLQSFMQQHSLYLQQQQQQHHQDSSSEHASNQERFGYFSSLKDHQHQF 134
Query: 303 DHLSNEKAAQEKIVKQLQHQLNEVQSKADEANRTLNDLDAAKKKLSIENSDLLRQLEEAE 482
L +K Q Q Q QLN +Q A ++L+++ L++QL+ +
Sbjct: 135 AELGRKKLEQAIQQLQEQLQLNVIQQTHLLQTADKKKASAPLQQLALQQQRLIQQLQITQ 194
Query: 483 SQ 488
SQ
Sbjct: 195 SQ 196
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 26.6 bits (56), Expect = 0.23
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Frame = +3
Query: 228 NKLKAKAEKERAQYFSEVNDL---RAGLDHLSNEKAAQEKIVKQLQHQLNEVQSKADEAN 398
N L K + +NDL + LD + + I + + H N + D N
Sbjct: 377 NDLDTKKWNNKISALRALNDLYNVKNTLDSYNGSMEINQNIAQNIDHAKNTI---IDYRN 433
Query: 399 RTLNDLDAAKKKLSIENSDLLRQLEEAESQVSQLSK 506
NDL ++K +IEN L R + + + + +K
Sbjct: 434 ---NDLSINEEKRTIENEQLNRMYKSYPNYIDKETK 466
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 340 IFSWAAFSLDKWSRPARRSL 281
I SW +F LD+ + PAR SL
Sbjct: 257 IVSWVSFWLDQSAVPARVSL 276
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 340 IFSWAAFSLDKWSRPARRSL 281
I SW +F LD+ + PAR SL
Sbjct: 257 IVSWVSFWLDQSAVPARVSL 276
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 72 QRWRHRLPRAFRRALQVHERGQRV 1
+RWR R+ A ++ RG+R+
Sbjct: 311 ERWRDRIYEAIHTGSVINTRGERI 334
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 465 QLEEAESQVSQLSKIKVSLTTQL 533
+L EAE + L K+K+ L + L
Sbjct: 1883 ELSEAECDIDSLKKLKLGLRSSL 1905
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 465 QLEEAESQVSQLSKIKVSLTTQL 533
+L EAE + L K+K+ L + L
Sbjct: 1879 ELSEAECDIDSLKKLKLGLRSSL 1901
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 340 IFSWAAFSLDKWSRPARRSL 281
I SW +F L++ + PAR +L
Sbjct: 236 IISWVSFWLNRNATPARVAL 255
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 340 IFSWAAFSLDKWSRPARRSL 281
I SW +F L++ + PAR +L
Sbjct: 236 IISWVSFWLNRNATPARVAL 255
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +2
Query: 410 RPGCR*EEAVHRELRPSPPTGGGRVPG 490
RP + E + +PSP TG + G
Sbjct: 348 RPSDKEEREAQKSQKPSPVTGASKSHG 374
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 340 IFSWAAFSLDKWSRPARRSL 281
I SW +F L++ + PAR +L
Sbjct: 175 IISWVSFWLNRNATPARVAL 194
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 455 PSPPTGGGRVP 487
PSPP G G VP
Sbjct: 396 PSPPRGPGGVP 406
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.128 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,323
Number of Sequences: 438
Number of extensions: 2509
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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