Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30842
         (823 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    23   2.6  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    23   2.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   4.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   4.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   6.0  

>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 480 GDKFSADEVDEAYDQMDID 536
           G+ FS D+    YD +DID
Sbjct: 16  GEVFSEDKYTTKYDNVDID 34


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 480 GDKFSADEVDEAYDQMDID 536
           G+ FS D+    YD +DID
Sbjct: 16  GEVFSEDKYTTKYDNVDID 34


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 384 SDEDDVVINAFKTFDEEGK 440
           ++ D+ ++NAFKT  +E K
Sbjct: 128 TERDNHLVNAFKTLTQEPK 146


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 401 DVIFVRAAGHAVGE 360
           D+I+VRA G AVG+
Sbjct: 34  DIIWVRADGSAVGD 47


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 468 LMTWGDKFSADEVDEAYD 521
           L  W DKF  +E+   YD
Sbjct: 71  LQNWMDKFRGEEIAILYD 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,184
Number of Sequences: 438
Number of extensions: 2958
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)