Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30840
         (385 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   1.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.0  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   1.4  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   1.8  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   1.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   2.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   5.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.6  
AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...    21   5.6  
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...    21   5.6  
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...    21   5.6  
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...    21   5.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   5.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   7.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    20   7.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    20   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.7  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 191 YHHVPRYRRQDAEGDHRPR 135
           Y H+ RY+ +  +GD R R
Sbjct: 159 YQHLHRYKEEALQGDGRMR 177


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 191 YHHVPRYRRQDAEGDHRPR 135
           Y H+ RY+ +  +GD R R
Sbjct: 159 YQHLHRYKEEALQGDGRMR 177


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 191 YHHVPRYRRQDAEGDHRPR 135
           Y H+ RY+ +  +GD R R
Sbjct: 159 YQHLHRYKEEALQGDGRMR 177


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 241 DVDIRKDLYANTVMSGGTTMYPGI 170
           D D+ KD     V+ GG+T  P I
Sbjct: 150 DADMTKDQIDEIVLVGGSTRIPKI 173


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 103 PPERKYSVWIGGSILASLSTFQQMWIRRRNTTS 5
           PP+    + +G +IL SL+ F  +   +  TTS
Sbjct: 236 PPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTS 268


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 103 PPERKYSVWIGGSILASLSTFQQMWIRRRNTTS 5
           PP+    + +G +IL SL+ F  +   +  TTS
Sbjct: 236 PPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTS 268


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -3

Query: 143 RPRALDHQDQDH-RSPREEVLR 81
           RPRA DHQ ++  + PR  + R
Sbjct: 317 RPRATDHQRRNEPKRPRPNIDR 338


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 228 RMSTSHFMMELYTV 269
           R+   HF +ELYTV
Sbjct: 119 RICYYHFTLELYTV 132


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 228 RMSTSHFMMELYTV 269
           R+   HF +ELYTV
Sbjct: 119 RICYYHFTLELYTV 132


>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
          protein.
          Length = 76

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 14 IPPSNPHLLEGGQGSQDGST 73
          IPP    L+  G+  +DG T
Sbjct: 36 IPPDQQRLIFAGKQLEDGRT 55


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
          protein.
          Length = 685

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 14 IPPSNPHLLEGGQGSQDGST 73
          IPP    L+  G+  +DG T
Sbjct: 36 IPPDQQRLIFAGKQLEDGRT 55



 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 14  IPPSNPHLLEGGQGSQDGST 73
           IPP    L+  G+  +DG T
Sbjct: 112 IPPDQQRLIFAGKQLEDGRT 131



 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 14  IPPSNPHLLEGGQGSQDGST 73
           IPP    L+  G+  +DG T
Sbjct: 188 IPPDQQRLIFAGKQLEDGRT 207



 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 14  IPPSNPHLLEGGQGSQDGST 73
           IPP    L+  G+  +DG T
Sbjct: 264 IPPDQQRLIFAGKQLEDGRT 283



 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 14  IPPSNPHLLEGGQGSQDGST 73
           IPP    L+  G+  +DG T
Sbjct: 340 IPPDQQRLIFAGKQLEDGRT 359



 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 14  IPPSNPHLLEGGQGSQDGST 73
           IPP    L+  G+  +DG T
Sbjct: 492 IPPDQQRLIFAGKQLEDGRT 511



 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 14  IPPSNPHLLEGGQGSQDGST 73
           IPP    L+  G+  +DG T
Sbjct: 568 IPPDQQRLIFAGKQLEDGRT 587



 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 14  IPPSNPHLLEGGQGSQDGST 73
           IPP    L+  G+  +DG T
Sbjct: 644 IPPDQQRLIFAGKQLEDGRT 663


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
          protein.
          Length = 64

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 14 IPPSNPHLLEGGQGSQDGST 73
          IPP    L+  G+  +DG T
Sbjct: 36 IPPDQQRLIFAGKQLEDGRT 55


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
          protein.
          Length = 112

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 14 IPPSNPHLLEGGQGSQDGST 73
          IPP    L+  G+  +DG T
Sbjct: 8  IPPDQQRLIFAGKQLEDGRT 27


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -3

Query: 179 PRYRRQDAEGDHRPRALDHQDQDHRSPR 96
           PRY R  A+G   PR   +   D R  R
Sbjct: 69  PRYGRAAAQGMPYPRFPPYDRMDIRDRR 96


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 104 SPREEVLRMDRWIHPGFPV 48
           +P  + + +  WIHP  P+
Sbjct: 533 NPLTDTIPIHVWIHPWIPL 551


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 213 AYRSLRMSTSHFMMEL 260
           AYR L +  SH M +L
Sbjct: 258 AYRDLWVDLSHMMQQL 273


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 213 AYRSLRMSTSHFMMEL 260
           AYR L +  SH M +L
Sbjct: 258 AYRDLWVDLSHMMQQL 273


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 71   WIHPGFPVHLPADVD 27
            W   G   +LP+D+D
Sbjct: 1834 WYRQGVGKYLPSDID 1848


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,801
Number of Sequences: 336
Number of extensions: 1869
Number of successful extensions: 25
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)