Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30840
(385 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 246 5e-66
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 246 6e-66
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 244 1e-65
SB_56| Best HMM Match : Actin (HMM E-Value=0) 244 1e-65
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 244 2e-65
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 242 6e-65
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 221 1e-58
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 1e-20
SB_54| Best HMM Match : Actin (HMM E-Value=0) 85 2e-17
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 4e-13
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 68 3e-12
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 9e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.002
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 34 0.035
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 32 0.18
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 29 0.98
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 1.7
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 29 1.7
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 28 2.3
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.3
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.0
SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.0
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.0
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 28 3.0
SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 4.0
SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4) 27 5.2
SB_22203| Best HMM Match : 7tm_1 (HMM E-Value=8e-08) 27 6.9
SB_12314| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_17734| Best HMM Match : zf-C2H2 (HMM E-Value=0.0003) 27 6.9
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 27 6.9
SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42) 26 9.2
SB_10793| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08) 26 9.2
SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_46935| Best HMM Match : Merozoite_SPAM (HMM E-Value=1.8) 26 9.2
SB_41631| Best HMM Match : Ank (HMM E-Value=0.00018) 26 9.2
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 246 bits (602), Expect = 5e-66
Identities = 114/123 (92%), Positives = 119/123 (96%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVITIGNERFRCPEAL QPSFLGMES GIHET YNSIMKCDVDIRKDLYANT
Sbjct: 212 KSYELPDGQVITIGNERFRCPEALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANT 271
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
VMSGGTTMYPG+ADRMQKEI+ALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 272 VMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 331
Query: 25 RRR 17
++
Sbjct: 332 SKQ 334
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 246 bits (601), Expect = 6e-66
Identities = 113/123 (91%), Positives = 119/123 (96%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANT
Sbjct: 201 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 260
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 261 VLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 320
Query: 25 RRR 17
++
Sbjct: 321 SKQ 323
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 244 bits (598), Expect = 1e-65
Identities = 112/123 (91%), Positives = 119/123 (96%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANT
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 25 RRR 17
++
Sbjct: 359 SKQ 361
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 244 bits (598), Expect = 1e-65
Identities = 112/123 (91%), Positives = 119/123 (96%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANT
Sbjct: 238 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 297
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 298 VLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 25 RRR 17
++
Sbjct: 358 SKQ 360
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 244 bits (597), Expect = 2e-65
Identities = 112/123 (91%), Positives = 119/123 (96%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANT
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGG+TMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 25 RRR 17
++
Sbjct: 359 SKQ 361
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 242 bits (593), Expect = 6e-65
Identities = 111/123 (90%), Positives = 119/123 (96%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVITIGNERFRCPEA+FQPSFLGMES GIHET YNSIMKCDVDIRKDLYANT
Sbjct: 238 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 297
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGG+TM+PGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 298 VLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 25 RRR 17
++
Sbjct: 358 SKQ 360
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 221 bits (541), Expect = 1e-58
Identities = 98/122 (80%), Positives = 114/122 (93%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
K+YELPDGQVI+IGNERFRCPEA+FQP+FLGME+ GIHE +YN IMKCDVDIRKDLY+N
Sbjct: 12 KTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNC 71
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 72 VLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLSTFQQMWI 131
Query: 25 RR 20
+
Sbjct: 132 AK 133
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 95.5 bits (227), Expect = 1e-20
Identities = 38/83 (45%), Positives = 57/83 (68%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
+ Y LPDG+V+ + ERF PEALFQP + +E G+ E ++N+I D+D R + Y +
Sbjct: 242 EQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHI 301
Query: 205 VMSGGTTMYPGIADRMQKEITAL 137
V+SGG+TMYPG+ R+++EI L
Sbjct: 302 VLSGGSTMYPGLPSRLEREIKQL 324
Score = 37.9 bits (84), Expect = 0.003
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -1
Query: 226 KDLYANTVMSGGTTMYPGIADRMQKEITA-LAPSTIKIKIIAPPERKYSVWIGGSILAS- 53
K LY V+ G T+ Q +TA KI+I PP RK+ V++GG++LA
Sbjct: 322 KQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADI 381
Query: 52 LSTFQQMWIRRR 17
+ W+ R+
Sbjct: 382 MKDKDSFWMTRK 393
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 85.0 bits (201), Expect = 2e-17
Identities = 37/62 (59%), Positives = 47/62 (75%)
Frame = -1
Query: 379 YELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVM 200
Y LPDGQ I IG+ERFR E LFQPS LG + GIHE+++ SI KCD+D+R +L+ N V+
Sbjct: 2285 YMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVL 2344
Query: 199 SG 194
SG
Sbjct: 2345 SG 2346
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 70.5 bits (165), Expect = 4e-13
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 17/122 (13%)
Frame = -1
Query: 355 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 179
+ + ERF PE F P F + + + E V N I C +D+R+ LY N V+SGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 178 PGIADRMQKEIT----------------ALAPSTIKIKIIAPPERKYSVWIGGSILASLS 47
R+Q++I + P I+ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 46 TF 41
F
Sbjct: 316 EF 317
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 67.7 bits (158), Expect = 3e-12
Identities = 29/85 (34%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = -1
Query: 295 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 116
G + G+ + V S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 115 KII---APPERKYSVWIGGSILASL 50
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 49.6 bits (113), Expect = 9e-07
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = -1
Query: 289 ESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST----- 125
E + + +S++ C +D RK L N V+ GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDK 113
Query: 124 --IK-IKIIAPP-ERKYSVWIGGSILASL 50
IK +K+ PP + W+GG+I SL
Sbjct: 114 LFIKTVKMHQPPVNANITAWLGGAIFGSL 142
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = -1
Query: 277 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 173
I E + +I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 257 IIEVLAFAIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 34.3 bits (75), Expect = 0.035
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFL 296
K Y LPDGQ+I+IG E E LF+P L
Sbjct: 869 KFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 325 PEALFQPSFLGMESCGIHETV 263
PE +FQPS LG+E GI ET+
Sbjct: 3 PEIIFQPSMLGLEQAGITETM 23
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 31.9 bits (69), Expect = 0.18
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = -3
Query: 281 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 102
R P+DR + HH RR H +HR H R++R+ +G+ L+ +D
Sbjct: 830 RPPQDRHRRHHHRRRHHN----NKHRKHSREHSRRRHQRKHHKGNDAQETLEEIFED--D 883
Query: 101 PREEVLRMDRWIHPG 57
R+E +D +++ G
Sbjct: 884 ARDEKENVDEFVNGG 898
Score = 27.9 bits (59), Expect = 3.0
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -3
Query: 305 FLPGYGIVRHP-RDRVQLHHEV-RRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRA 132
F+ G G++ H + Q+ E R + G +HRH R +HH ++ R+ + + A
Sbjct: 894 FVNGGGMMEHELQSDSQISQETGARENDPGKKHKHRHRRHHHHRRQHNRKIKKHRRKHSA 953
Query: 131 LDHQ 120
H+
Sbjct: 954 RKHE 957
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 29.5 bits (63), Expect = 0.98
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 78 GSVDPSWLPCPPSSRCGFEGG 16
G+ P W+ CPP S CG G
Sbjct: 777 GASRPDWIECPPGSYCGEGSG 797
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 63 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 200
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 2/75 (2%)
Frame = -3
Query: 278 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--R 105
HP ++ HHE R P H H P ++ E P DH++++
Sbjct: 316 HPPEQ---HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAH 372
Query: 104 SPREEVLRMDRWIHP 60
P + +R +HP
Sbjct: 373 PPEQHHEEEERGVHP 387
Score = 26.2 bits (55), Expect = 9.2
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -3
Query: 254 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAE-GDHRP-RALDHQDQDHRSPREEVLR 81
HHE R P + H H P ++ E G H P + L+ +++ P ++
Sbjct: 307 HHEEEERGVHPPEQHHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEE 366
Query: 80 MDRWIHP 60
+R HP
Sbjct: 367 EERGAHP 373
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 2.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 211 NTVMSGGTTMYPGIADRMQKEITALAP 131
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 2.3
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = -3
Query: 281 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYR--RQDAEGDHRPR--ALDHQDQ 114
RH R R + R RH RH H R++ R + R R H+
Sbjct: 23 RHERSRHETRQHERSRHKTSRHESSRHKTSRHERSRHKTSRHETSRHERSRHETRQHERS 82
Query: 113 DHRSPREEVLRMDRWIH 63
H++ R E R ++ H
Sbjct: 83 RHKTSRHETSRHEKSRH 99
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 28.3 bits (60), Expect = 2.3
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = -3
Query: 326 SRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGD 147
+R ++P LPG H R R HH ++H ++ HH Q +
Sbjct: 930 ARPNMPGTLPGNYPESHKRHRHSHHHH------------YQHYQYNHHHDHQSHQHHDSH 977
Query: 146 HRPRALDHQ 120
H LDH+
Sbjct: 978 HHREVLDHK 986
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.3 bits (60), Expect = 2.3
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = -3
Query: 284 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP-RYRRQDAEGDHRPRALDHQDQD- 111
V HPR V +H HP V HR +H + RQDA DH + + H QD
Sbjct: 606 VVHPRRDV-VHPRQDVVHPRQDVDHHRQDVDHHRQDVDHHRQDA--DHHRQDVVHPRQDV 662
Query: 110 -HRSPREEVLRMDRWIHPGFPVHLPADVD 27
HR + R D H VH D D
Sbjct: 663 VHRRQDADHRRQDADHHRQDVVHPRQDAD 691
Score = 27.1 bits (57), Expect = 5.2
Identities = 20/70 (28%), Positives = 25/70 (35%)
Frame = -3
Query: 284 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 105
V H R V H + H V + V +RRQDA+ + QD DH
Sbjct: 634 VDHHRQDVDHHRQDADHHRQDVVHPRQDVVHRRQDADHRRQDADHHRQDVVHPRQDADHH 693
Query: 104 SPREEVLRMD 75
E R D
Sbjct: 694 RQDAEHHRQD 703
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 2.3
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -3
Query: 275 PRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 105
PRDR + E RRR P R+ R + Y PR RR+ R R D R
Sbjct: 854 PRDRRRRSPEHRRRREASPPRRDR--KRYDSPPRRRRRSPSPPPRRRRRDSYSPSRR 908
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 214 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 95
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_4199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 3.0
Identities = 18/73 (24%), Positives = 27/73 (36%)
Frame = -3
Query: 281 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 102
RH R R + R RH RH H R++ E R+ H+ + H
Sbjct: 63 RHERSRHETRQHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERS-RHETRQHER 121
Query: 101 PREEVLRMDRWIH 63
R + R ++ H
Sbjct: 122 SRHKTSRHEKSRH 134
Score = 27.1 bits (57), Expect = 5.2
Identities = 19/73 (26%), Positives = 26/73 (35%)
Frame = -3
Query: 281 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRS 102
+H R R + RH + RH H R+ R E R+ H+ H
Sbjct: 73 QHERSRHKTSRHESSRHKTSRHGRSRHKTSRHETSRHERSRHETRQHERS-RHKTSRHEK 131
Query: 101 PREEVLRMDRWIH 63
R E R +R H
Sbjct: 132 SRHETSRHERSRH 144
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 3.0
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = -3
Query: 254 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 81
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 80 MDRWIHP 60
+R +HP
Sbjct: 214 EERGVHP 220
Score = 26.6 bits (56), Expect = 6.9
Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = -3
Query: 254 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 81
HHE R P + H H P ++ E P H++++ P +
Sbjct: 126 HHEEEERGAHPPGQHHEEEERGAHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEE 185
Query: 80 MDRWIHP 60
+R +HP
Sbjct: 186 EERGVHP 192
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = -3
Query: 284 VRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHR 105
++HP ++ H + ++ P + HHVP + +A G+ R Q+ D+
Sbjct: 550 IQHPVEKAIQHAQEKKYQP----ELEKKTIKSHHVPGQDKTEARGEERIAVWSTQNGDYY 605
Query: 104 SPREE 90
R+E
Sbjct: 606 DQRDE 610
>SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 490
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = -3
Query: 251 HEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDAE 153
H R+H P R HR+ R + +P RY R+DA+
Sbjct: 307 HRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKDAK 343
Score = 27.1 bits (57), Expect = 5.2
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = -3
Query: 320 GSLPAFLP-GYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDA 156
G++ +LP GI + + + H R+H P R HR+ R + +P RY R+ A
Sbjct: 185 GNMQRYLPESIGIPGNMQRYLTRIHRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKHA 244
Query: 155 E 153
+
Sbjct: 245 K 245
>SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 4.0
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 214 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 95
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNHLTELGIVKEKIIAPPE 84
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = -3
Query: 293 YGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDH 144
Y +++PR R HH +H + H H +HH + Q H
Sbjct: 247 YHKLKNPRHRYHHHHHHHHQH--NHHQHHHHHHHHHHNHHHHHQQHHHHH 294
>SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4)
Length = 126
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 170 RRQDAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFP 51
RRQ HR R D +D+D R L DR+ + +P
Sbjct: 4 RRQGTATIHRYRQSDLRDRDRRRVLPRFLEQDRFDNSDYP 43
>SB_22203| Best HMM Match : 7tm_1 (HMM E-Value=8e-08)
Length = 479
Score = 26.6 bits (56), Expect = 6.9
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 215 RQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVL 84
RQ R VR H VPR +R PR H+ PR++ L
Sbjct: 289 RQQRLVRSTHQVPRQQRLVRSTHQVPRQQRLVRSTHQVPRQQRL 332
Score = 26.6 bits (56), Expect = 6.9
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 215 RQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVL 84
RQ R VR H VPR +R PR H+ PR++ L
Sbjct: 302 RQQRLVRSTHQVPRQQRLVRSTHQVPRQQRLVRSTHQVPRQQRL 345
>SB_12314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 26.6 bits (56), Expect = 6.9
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -3
Query: 137 RALDHQDQDHRSPREEVLRMDRWI 66
+ LDH+ + H ++E+ R+ +WI
Sbjct: 62 KELDHKSELHSKQKKEIKRLKKWI 85
>SB_17734| Best HMM Match : zf-C2H2 (HMM E-Value=0.0003)
Length = 369
Score = 26.6 bits (56), Expect = 6.9
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -3
Query: 137 RALDHQDQDHRSPREEVLRMDRWI 66
+ LDH+ + H ++E+ R+ +WI
Sbjct: 62 KELDHKSELHSKQKKEIKRLKKWI 85
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 26.6 bits (56), Expect = 6.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 254 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQ 162
HH R RH +HRH +HH Y R+
Sbjct: 324 HHHQRHRHR----HRHRHRHHHHHHHEYNRR 350
>SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42)
Length = 355
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Frame = +2
Query: 221 VLTDVDV--ALHDG----VVHGLVDAARFHTQEGRLEESLG 325
+ TD ++ ALHD +V GLV ++H QEG S+G
Sbjct: 218 IYTDDEIWSALHDAKVGPLVSGLVGKLKYHIQEGGANFSVG 258
>SB_10793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = -3
Query: 188 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHP 60
HH PRY + P H PR MD+ HP
Sbjct: 355 HHGPRYTSHTMDQGTHPTIRTKVHIQHHGPRYTSNTMDQGTHP 397
>SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)
Length = 654
Score = 26.2 bits (55), Expect = 9.2
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -1
Query: 286 SCGIHETVYNSIMKCDVD-IRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKI 110
S + + I ++D ++ DL ++ + T GI + + ++ L S ++KI
Sbjct: 222 SFSVKSVSFRKIKSINIDTLKNDLRSSELHHSPKTDLNGIVKKYNQTLSTLLDSHAQVKI 281
Query: 109 IAPPERKYSVWIGGSILASL 50
R W G I A++
Sbjct: 282 KTITNRPRLPWFGEDIGAAI 301
>SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2126
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 350 HR*REVPLSRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GP 219
HR P++ LPA + PR R + + R RHP P
Sbjct: 859 HRINRSPVADDYLPALRHRSSVSPDPRGRPPISPDYRGRHPISP 902
>SB_46935| Best HMM Match : Merozoite_SPAM (HMM E-Value=1.8)
Length = 625
Score = 26.2 bits (55), Expect = 9.2
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = -3
Query: 287 IVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH 108
IV P R + +E+R P G R+H H + P+ R+ + ++L H+
Sbjct: 516 IVVDPTRRHSIPNEIRPLEPRGECRRHTHHHKHKVAPKKRKMSR---FKRKSLQHELYGE 572
Query: 107 RSPREEVLRMDRW 69
+ E LR R+
Sbjct: 573 QVRIECDLRQKRY 585
>SB_41631| Best HMM Match : Ank (HMM E-Value=0.00018)
Length = 353
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -3
Query: 188 HHVPRYRRQDAEGDHRPRALDHQDQDH---RSPREEVLRMDRWIHPGFPVHLP 39
HH +R +++ D R R+ D++ Q H R REE + P P+ P
Sbjct: 172 HHHSDHRDEESHRDGRKRSKDYEKQHHNDRRLSREEGSYREGHRSPSQPLFQP 224
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,299,836
Number of Sequences: 59808
Number of extensions: 246816
Number of successful extensions: 1099
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 656970245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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