Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30840
(385 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 248 8e-67
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 248 8e-67
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 248 8e-67
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 248 8e-67
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 248 8e-67
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 248 8e-67
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 248 1e-66
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 248 1e-66
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 248 1e-66
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 241 9e-65
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 234 1e-62
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 132 6e-32
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 116 8e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 98 2e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 95 2e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 81 3e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 69 1e-12
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 69 1e-12
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 46 1e-05
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 1.1
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 1.5
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 3.4
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 4.5
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 4.5
Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical pr... 26 7.9
U41264-3|AAA82423.1| 574|Caenorhabditis elegans Hypothetical pr... 26 7.9
U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical pr... 26 7.9
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 26 7.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 248 bits (608), Expect = 8e-67
Identities = 114/123 (92%), Positives = 120/123 (97%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 25 RRR 17
++
Sbjct: 359 SKQ 361
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 248 bits (608), Expect = 8e-67
Identities = 114/123 (92%), Positives = 120/123 (97%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 25 RRR 17
++
Sbjct: 359 SKQ 361
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 248 bits (608), Expect = 8e-67
Identities = 114/123 (92%), Positives = 120/123 (97%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 25 RRR 17
++
Sbjct: 359 SKQ 361
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 248 bits (608), Expect = 8e-67
Identities = 114/123 (92%), Positives = 120/123 (97%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANT
Sbjct: 195 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 254
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 255 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 314
Query: 25 RRR 17
++
Sbjct: 315 SKQ 317
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 248 bits (608), Expect = 8e-67
Identities = 114/123 (92%), Positives = 120/123 (97%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANT
Sbjct: 225 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 284
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 285 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 344
Query: 25 RRR 17
++
Sbjct: 345 SKQ 347
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 248 bits (608), Expect = 8e-67
Identities = 114/123 (92%), Positives = 120/123 (97%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVIT+GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 25 RRR 17
++
Sbjct: 359 SKQ 361
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 248 bits (606), Expect = 1e-66
Identities = 113/123 (91%), Positives = 120/123 (97%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 25 RRR 17
++
Sbjct: 359 SKQ 361
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 248 bits (606), Expect = 1e-66
Identities = 113/123 (91%), Positives = 120/123 (97%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 25 RRR 17
++
Sbjct: 359 SKQ 361
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 248 bits (606), Expect = 1e-66
Identities = 113/123 (91%), Positives = 120/123 (97%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 358
Query: 25 RRR 17
++
Sbjct: 359 SKQ 361
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 241 bits (591), Expect = 9e-65
Identities = 112/123 (91%), Positives = 119/123 (96%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANT
Sbjct: 239 KSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANT 298
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTMYPGIADRMQKEITALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 299 VLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 25 RRR 17
++
Sbjct: 358 SKQ 360
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 234 bits (573), Expect = 1e-62
Identities = 107/123 (86%), Positives = 115/123 (93%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHET Y SIMKCDVDIRKDLYANT
Sbjct: 238 KSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANT 297
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGT+M+PGIADRMQKEI LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 298 VLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 25 RRR 17
++
Sbjct: 358 SKQ 360
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 132 bits (320), Expect = 6e-32
Identities = 62/122 (50%), Positives = 82/122 (67%)
Frame = -1
Query: 382 SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTV 203
SY LPD I I N FR PE LF+P +G E G+ V SIMKCDVD+R+ LY+N V
Sbjct: 238 SYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIV 297
Query: 202 MSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIR 23
+SGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+
Sbjct: 298 LSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLG 357
Query: 22 RR 17
++
Sbjct: 358 KK 359
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 116 bits (278), Expect = 8e-27
Identities = 57/136 (41%), Positives = 82/136 (60%), Gaps = 13/136 (9%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
+ Y LPDG+VI +G ERF PE LFQP + +E G+ E ++ I D+D R D Y +
Sbjct: 242 QQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHI 301
Query: 205 VMSGGTTMYPGIADRMQKEITAL-----------APSTIKIKIIAPPERKYSVWIGGSIL 59
V+SGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++L
Sbjct: 302 VLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVL 361
Query: 58 ASL--STFQQMWIRRR 17
A+L Q W+ ++
Sbjct: 362 ANLMKDRDQDFWVSKK 377
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 97.9 bits (233), Expect = 2e-21
Identities = 39/108 (36%), Positives = 72/108 (66%)
Frame = -1
Query: 349 IGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 170
I N RF C E LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 169 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
A+++++E++ + P+TI ++ P R + ++G I+AS STF+ I
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCI 535
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 95.1 bits (226), Expect = 2e-20
Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Frame = -1
Query: 379 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 215
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 214 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLST 44
+N ++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 43 FQQMWIRR 20
FQQMW+ +
Sbjct: 413 FQQMWVSK 420
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 81.0 bits (191), Expect = 3e-16
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 17/125 (13%)
Frame = -1
Query: 355 ITIGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 179
+ +G ERF PE F P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 178 PGIADRMQKEITALA----------------PSTIKIKIIAPPERKYSVWIGGSILASLS 47
A ++Q+++ L+ P I +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 46 TFQQM 32
F Q+
Sbjct: 396 EFYQV 400
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 68.9 bits (161), Expect = 1e-12
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = -1
Query: 355 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 176
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 175 GIADRMQKEITALAPSTIKIKI 110
G +R+++E+ ++ P+ + +
Sbjct: 323 GFRERLEREVRSMLPAEYGLNV 344
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 68.9 bits (161), Expect = 1e-12
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = -1
Query: 355 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 176
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 175 GIADRMQKEITALAPSTIKIKI 110
G +R+++E+ ++ P+ + +
Sbjct: 323 GFRERLEREVRSMLPAEYGLNV 344
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 45.6 bits (103), Expect = 1e-05
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 9/81 (11%)
Frame = -1
Query: 265 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 101
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 100 PERK----YSVWIGGSILASL 50
E K + W+G S+L SL
Sbjct: 254 SEIKNTPLFVSWLGASLLGSL 274
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -3
Query: 278 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 135
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 179 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 81
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = -3
Query: 254 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 75
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 74 RWIHPG 57
H G
Sbjct: 487 HGTHHG 492
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 137 RALDHQDQDHRSPREEVLRMDRW 69
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 137 RALDHQDQDHRSPREEVLRMDRW 69
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
>Z47070-4|CAA87342.1| 363|Caenorhabditis elegans Hypothetical
protein T09B9.5 protein.
Length = 363
Score = 26.2 bits (55), Expect = 7.9
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 156 CILSAIPGYMVVPPDM 203
C+LSA+P Y +VPP +
Sbjct: 300 CMLSALPEYSLVPPQV 315
>U41264-3|AAA82423.1| 574|Caenorhabditis elegans Hypothetical
protein F10E7.9 protein.
Length = 574
Score = 26.2 bits (55), Expect = 7.9
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = +3
Query: 9 VVFLLRIHICWKVDREARMDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV 188
+VFL+ +++C D P+ Y L G A + +L+ + + ILS +P +
Sbjct: 331 IVFLVGLYVCSLSSTVGPNDNPVLAGYLLMGVASLFVLLGD----LNQLAILSTMP--FL 384
Query: 189 VPPDMTVLAYRSLRMS 236
+ +Y SL MS
Sbjct: 385 ITYAYVNYSYVSLAMS 400
>U23523-8|AAC46563.1| 87|Caenorhabditis elegans Hypothetical
protein F53A9.8 protein.
Length = 87
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 239 RRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH 108
+ H G H H +HH + A+G+H A DH D H
Sbjct: 4 QEHGHGDGDHHDHHDEHHHEDHHEH-GADGEHVHHAGDHCDTQH 46
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = -3
Query: 254 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH 108
H + R R G R+HR + + R+R + +E R D + + H
Sbjct: 291 HRDHRHRDHRGEHREHREHKEHRRDDRHRSERSERSERSERSDRERKRH 339
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,742,862
Number of Sequences: 27780
Number of extensions: 168657
Number of successful extensions: 713
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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