Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30840
(385 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 231 2e-61
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 229 5e-61
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 229 5e-61
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 228 1e-60
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 228 1e-60
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 226 3e-60
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 222 6e-59
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 222 6e-59
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 220 2e-58
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 213 3e-56
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 204 1e-53
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 176 5e-45
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 119 6e-28
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 109 8e-25
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 95 2e-20
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 89 9e-19
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 70 6e-13
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 66 6e-12
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 59 1e-09
At5g43500.2 68418.m05318 expressed protein 44 3e-05
At5g43500.1 68418.m05319 expressed protein 44 3e-05
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 34 0.028
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 29 0.81
At3g26350.1 68416.m03287 expressed protein ; expression support... 28 2.5
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 28 2.5
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 3.3
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 3.3
At4g30520.1 68417.m04333 leucine-rich repeat family protein / pr... 27 3.3
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 3.3
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 27 4.3
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 27 4.3
At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel... 27 4.3
At2g06010.1 68415.m00657 expressed protein 27 4.3
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 27 5.7
At4g10290.1 68417.m01692 hypothetical protein 27 5.7
At3g53340.1 68416.m05885 CCAAT-box binding transcription factor,... 27 5.7
At3g50690.1 68416.m05546 leucine-rich repeat family protein 27 5.7
At3g04160.1 68416.m00440 expressed protein ; expression supporte... 27 5.7
At2g42880.1 68415.m05309 mitogen-activated protein kinase, putat... 27 5.7
At5g07240.1 68418.m00826 calmodulin-binding family protein conta... 26 7.5
At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3) ident... 26 7.5
At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3) ident... 26 7.5
At2g16990.1 68415.m01959 expressed protein 26 7.5
At4g32280.1 68417.m04592 auxin-responsive AUX/IAA family protein... 26 9.9
At4g06603.1 68417.m01028 expressed protein 26 9.9
At3g53760.1 68416.m05939 tubulin family protein similar to SP|Q9... 26 9.9
At2g34790.1 68415.m04272 FAD-binding domain-containing protein s... 26 9.9
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 26 9.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 231 bits (564), Expect = 2e-61
Identities = 104/122 (85%), Positives = 113/122 (92%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KSYELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 240 KSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNI 299
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 25 RR 20
+
Sbjct: 360 AK 361
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 229 bits (560), Expect = 5e-61
Identities = 102/122 (83%), Positives = 114/122 (93%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
K+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 240 KNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNI 299
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 25 RR 20
+
Sbjct: 360 AK 361
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 229 bits (560), Expect = 5e-61
Identities = 102/122 (83%), Positives = 114/122 (93%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
K+YELPDGQVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 240 KNYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNI 299
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 25 RR 20
+
Sbjct: 360 AK 361
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 228 bits (557), Expect = 1e-60
Identities = 103/122 (84%), Positives = 113/122 (92%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
K+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 240 KNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNI 299
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 25 RR 20
+
Sbjct: 360 SK 361
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 228 bits (557), Expect = 1e-60
Identities = 103/122 (84%), Positives = 113/122 (92%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
K+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 240 KNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNI 299
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 25 RR 20
+
Sbjct: 360 SK 361
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 226 bits (553), Expect = 3e-60
Identities = 102/122 (83%), Positives = 113/122 (92%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
K+YELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 240 KNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNI 299
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 25 RR 20
+
Sbjct: 360 SK 361
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 222 bits (543), Expect = 6e-59
Identities = 101/122 (82%), Positives = 111/122 (90%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 240 KSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNI 299
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 25 RR 20
+
Sbjct: 360 AK 361
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 222 bits (543), Expect = 6e-59
Identities = 101/122 (82%), Positives = 111/122 (90%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
KS+ELPDGQVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 240 KSFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNI 299
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 25 RR 20
+
Sbjct: 360 AK 361
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 220 bits (538), Expect = 2e-58
Identities = 101/120 (84%), Positives = 111/120 (92%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
K+YELPDGQVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 240 KNYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNI 299
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQ+ I
Sbjct: 300 VLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKI 359
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 213 bits (521), Expect = 3e-56
Identities = 95/122 (77%), Positives = 108/122 (88%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
++YELPDGQVITIG ERFRCPE LFQ S +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 241 RTYELPDGQVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNI 300
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTM+PGIADRM KEI ALAP ++KIK++APPERKYSVW+GGSILASLS+F MWI
Sbjct: 301 VLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWI 360
Query: 25 RR 20
+
Sbjct: 361 TK 362
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 204 bits (499), Expect = 1e-53
Identities = 92/122 (75%), Positives = 106/122 (86%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
++YELPDGQVITIG ERFRCPE LFQPS +GME+ GIHE YNSIMKCD DIRKDLY N
Sbjct: 192 RTYELPDGQVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNI 251
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
V+SGGTTM+ GI +RM KEI ALA + ++IKI+APPERKYSVWIGGSILASLST++QMWI
Sbjct: 252 VLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWI 311
Query: 25 RR 20
+
Sbjct: 312 TK 313
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 176 bits (428), Expect = 5e-45
Identities = 79/122 (64%), Positives = 95/122 (77%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
K+Y LPDGQ ITI ERF CPE LFQPS +G ES GIHE NSI+KC VD R+D+Y N
Sbjct: 229 KTYVLPDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNI 288
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 26
+M+GGTTM GI +RM KE+ AL PS++K+K++ PPE + SVWIGGSILASLSTF QMWI
Sbjct: 289 LMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWI 348
Query: 25 RR 20
+
Sbjct: 349 TK 350
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 119 bits (287), Expect = 6e-28
Identities = 59/136 (43%), Positives = 90/136 (66%), Gaps = 15/136 (11%)
Frame = -1
Query: 382 SYELPDGQVITIGNERFRCPEALFQPSFL----GMESC--------GIHETVYNSIMKCD 239
SYELPDGQ + IG +RF+ P+ +F PS + GME G+ V SI KCD
Sbjct: 290 SYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCD 349
Query: 238 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIA---PPERKYSVWIGG 68
VDIR++LY++ +++GGT+ + +R++K++ +P + ++K++A ER++SVWIGG
Sbjct: 350 VDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGG 409
Query: 67 SILASLSTFQQMWIRR 20
SILASL +FQQMW +
Sbjct: 410 SILASLGSFQQMWFSK 425
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 109 bits (261), Expect = 8e-25
Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 12/136 (8%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
K+Y LPDG+VI +G ERF+ PEALF P + +E G+ + V+ I + D+D R LY +
Sbjct: 239 KNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHI 298
Query: 205 VMSGGTTMYPGIADRMQKEI------TALAPS-----TIKIKIIAPPERKYSVWIGGSIL 59
V+SGG+TMYPG+ R++KEI T L + ++++I PP RK+ V++GG++L
Sbjct: 299 VLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVL 358
Query: 58 AS-LSTFQQMWIRRRN 14
A + + WI R +
Sbjct: 359 AGIMKDAPEFWINRED 374
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 94.7 bits (225), Expect = 2e-20
Identities = 52/118 (44%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
Frame = -1
Query: 385 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANT 206
+ + LPDGQVI+IG ER+ EALFQPS LG+E GI E + I + + L NT
Sbjct: 221 EQHTLPDGQVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENT 280
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPE------RKYSVWIGGSILASL 50
V+ GGTT G R QKE L S I+ ++ PPE YS W+GG+ILA +
Sbjct: 281 VLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKV 337
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 89.0 bits (211), Expect = 9e-19
Identities = 40/112 (35%), Positives = 65/112 (58%)
Frame = -1
Query: 355 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 176
I + NERF PE LFQP+ LGM G+ E + +I C ++ LY + +++GG+T++P
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFP 352
Query: 175 GIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWIRR 20
+ +R++ E+ L P +KI + VW GGS+LAS F+ M + +
Sbjct: 353 QLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTK 404
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 69.7 bits (163), Expect = 6e-13
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Frame = -1
Query: 352 TIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCD-VDIRKD--LYANTVMSGGTTM 182
T+ ERF+ E LFQP GM + +H+ V + CD + D + V++GG+
Sbjct: 344 TLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSAC 403
Query: 181 YPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLSTFQQMW 29
PG+++R+++E+ PS+I I++I PP + W G ++++LS F W
Sbjct: 404 LPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPW 456
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 66.5 bits (155), Expect = 6e-12
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Frame = -1
Query: 355 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKC---DVDIRKDLYANTVMSGGTT 185
I IG ERFRCPE LF P+ +G++ G+ E SI + + ++ + L ++ +M+GG +
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCS 648
Query: 184 MYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTF 41
+ PG+ +R++ I + P I ++ + W G S A+ F
Sbjct: 649 LLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNF 696
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 58.8 bits (136), Expect = 1e-09
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Frame = -1
Query: 349 IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPG 173
+G ERF PE F P + + + + I +D R+ LY N V+SGG+TM+
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339
Query: 172 IADRMQKEITALAPS----------------TIKIKIIAPPERKYSVWIGGSILASLSTF 41
R+Q+++ + + +++ +++ P ++++VW GGS+L+S F
Sbjct: 340 FGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWFGGSVLSSTPEF 399
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 44.4 bits (100), Expect = 3e-05
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = -1
Query: 289 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 113
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 112 II----APPERKYSVWIGGSILASLSTFQQMWIRR 20
+ + E ++ W GG+IL L ++ WI R
Sbjct: 518 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIER 552
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 44.4 bits (100), Expect = 3e-05
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = -1
Query: 289 ESCGIHETVYNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 113
E G+ E + +SI+ +D+R+ L+++ + GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 112 II----APPERKYSVWIGGSILASLSTFQQMWIRR 20
+ + E ++ W GG+IL L ++ WI R
Sbjct: 530 TVQVLPSRTEPQFVTWKGGAILGILDFGREAWIER 564
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 34.3 bits (75), Expect = 0.028
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = -1
Query: 277 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 98
I E +Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 97 ERKYS 83
+RK++
Sbjct: 393 DRKHA 397
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 29.5 bits (63), Expect = 0.81
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = -1
Query: 277 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 98
I E +Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 97 ERKYS 83
ERK++
Sbjct: 394 ERKHA 398
>At3g26350.1 68416.m03287 expressed protein ; expression
supported by MPSS
Length = 356
Score = 27.9 bits (59), Expect = 2.5
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +2
Query: 11 RIPPSNPHLLEGGQG-SQDGSTDPY 82
RIP NPHL GG SQ S P+
Sbjct: 15 RIPSQNPHLKSGGASTSQTSSNQPH 39
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 162 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 317
L+ + G+++ D+ +A YR L M Y+V W + + WKR
Sbjct: 571 LTEVEGFLLSADDLKFVATQYRRLHSKQLRHMFRFYSVQWQTWAACFIQAAWKR 624
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -3
Query: 281 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 108
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -3
Query: 281 RHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDH-QDQDH 108
RH RD+ + + +HRH + Y D EG+HR R+ H +D D+
Sbjct: 672 RHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSDNEGEHRHRSSKHSKDVDY 730
>At4g30520.1 68417.m04333 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 648
Score = 27.5 bits (58), Expect = 3.3
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 240 SHFMMELYTVSWMPHDSIPRKEGWKRASGQRNLSLPMVIT*PSGS 374
S F MEL +S H ++ R G+ SG+R L P + P+GS
Sbjct: 343 SQFRMELEMISLAVHKNLLRLIGYCATSGERLLVYPYM---PNGS 384
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 161 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 48
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 27.1 bits (57), Expect = 4.3
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 107
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 209 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.1 bits (57), Expect = 4.3
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 205 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 107
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 416 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
>At2g46440.1 68415.m05779 cyclic nucleotide-regulated ion channel,
putative (CNGC11) similar to cyclic nucleotide and
calmodulin-regulated ion channel (cngc3) GI:4581201 from
[Arabidopsis thaliana]
Length = 588
Score = 27.1 bits (57), Expect = 4.3
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 162 LSAIPGYMVVPPDMTVLA--YRSLRMSTSHFMMELYTVSWMPHDSIPRKEGWKR 317
L+ + G+++ D+ +A YR L M Y++ W + + WKR
Sbjct: 496 LTEVEGFVISADDLKFVATQYRRLHSKQLQHMFRFYSLQWQTWAACFIQAAWKR 549
>At2g06010.1 68415.m00657 expressed protein
Length = 188
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 287 FHTQEGRLEESLGTTEPLVTDGDHL 361
F+ GRLE SL E +VT D+L
Sbjct: 164 FNMSSGRLEASLDRVEAIVTHSDYL 188
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 26.6 bits (56), Expect = 5.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 352 TIGNERFRCPEALFQPSFLGMESCGIHETVY 260
T+ ERF+ E LFQP G+ +H+ VY
Sbjct: 344 TLSKERFQTGEILFQPRLAGII---VHKLVY 371
>At4g10290.1 68417.m01692 hypothetical protein
Length = 120
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 225 LRMSTSHFMMELYTVSWMPHDSIPRKEGWK 314
+R ++ + EL SW +S+PRK WK
Sbjct: 23 MRQTSDAKLAELGVTSWQLWESMPRKFPWK 52
>At3g53340.1 68416.m05885 CCAAT-box binding transcription factor,
putative similar to CAAT-box DNA binding protein subunit
B (NF-YB) (SP:P25209) (GI:22380) [Zea mays]; contains
Pfam PF00808 : Histone-like transcription factor
(CBF/NF-Y) and archaeal histone
Length = 228
Score = 26.6 bits (56), Expect = 5.7
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -3
Query: 161 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPVHLPADVDSKEEYDE 6
++ GD PR+L+ ++QD P + + R + G P++ D+KE E
Sbjct: 15 ESGGDQSPRSLNVREQDRFLP---IANISRIMKRGLPLNGKIAKDAKETMQE 63
>At3g50690.1 68416.m05546 leucine-rich repeat family protein
Length = 447
Score = 26.6 bits (56), Expect = 5.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 167 RQDAEGDHRPRALDHQDQDHRSPREE 90
+ DAEG+ RP + D D++ EE
Sbjct: 153 KTDAEGNERPESDDEDDEEDEEDEEE 178
>At3g04160.1 68416.m00440 expressed protein ; expression supported
by MPSS
Length = 712
Score = 26.6 bits (56), Expect = 5.7
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = -3
Query: 272 RDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPRE 93
RDR + H RR ++H + R R+ + D++ + D D+ + PR
Sbjct: 639 RDRRKDKHNDRRDDEFTRTKRHSIEGESYQNYRSSREKSSSDYKTKRDDPYDRRSQQPRN 698
Query: 92 EVLRMDRWI 66
+ L DR+I
Sbjct: 699 QNLFEDRYI 707
>At2g42880.1 68415.m05309 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK20) mitogen-activated protein
kinase (MAPK)(AtMPK20), PMID:12119167
Length = 606
Score = 26.6 bits (56), Expect = 5.7
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = -1
Query: 277 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP 98
I E + I++ + KD + N + +YP D+ +++ L ++ K +AP
Sbjct: 348 IRELISREILEYHPQLLKD-HMNGA-DKASFLYPSAVDQFRRQFAHLEENSGKTGPVAPL 405
Query: 97 ERKYSVWIGGSILASLSTF---QQMWIRRRNTTSP 2
ERK++ +++ S + Q + NT +P
Sbjct: 406 ERKHASLPRSTVIHSTAVARGGQPKLMNNTNTLNP 440
>At5g07240.1 68418.m00826 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 401
Score = 26.2 bits (55), Expect = 7.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 134 ALDHQDQDHRSPREEVLRMDRW 69
A+DH +HRSP +D+W
Sbjct: 205 AMDHHHNNHRSPMGSSRLLDQW 226
>At2g36010.3 68415.m04422 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 485
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 362 SGDHHR*REVPLSRGSLPAFLPGYGIVRHPRDRVQLHHEVRRR 234
S D+HR LS + +F+ G G+V D V + R+R
Sbjct: 54 SDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAVVVRSPSRKR 96
>At2g36010.1 68415.m04420 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 483
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -3
Query: 362 SGDHHR*REVPLSRGSLPAFLPGYGIVRHPRDRVQLHHEVRRR 234
S D+HR LS + +F+ G G+V D V + R+R
Sbjct: 54 SDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAVVVRSPSRKR 96
>At2g16990.1 68415.m01959 expressed protein
Length = 456
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 126 VEGARAVISFCILSAIPGYMVVP--PDMTVLA 215
+ G R +++ LSA G+MVVP D+TV A
Sbjct: 5 IGGLRHMLATVFLSAFAGFMVVPVITDVTVAA 36
>At4g32280.1 68417.m04592 auxin-responsive AUX/IAA family protein
contains Pfam profile: PF02309: AUX/IAA family
Length = 251
Score = 25.8 bits (54), Expect = 9.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 209 HRHVRWYHHVPRYRR 165
HRH+R +HH P + R
Sbjct: 113 HRHIRNHHHCPYHHR 127
>At4g06603.1 68417.m01028 expressed protein
Length = 786
Score = 25.8 bits (54), Expect = 9.9
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 159 ILSAIPGYMVVPPDMTVLAYRSLRMSTSHFMMELYTVSWMPH 284
+L G ++ PPD T+L R ++SHF+ + +++ M H
Sbjct: 519 LLGGCVGPLLPPPD-TLLESRKYAETSSHFLRAVASMNRMVH 559
>At3g53760.1 68416.m05939 tubulin family protein similar to
SP|Q9SC88 Gamma-tubulin complex component 4 homolog
{Medicago truncatula}, SP|Q9UGJ1|GCP4_HUMAN
Gamma-tubulin complex component 4 {Homo sapiens};
contains Pfam profile PF04130: Spc97 / Spc98 family
Length = 745
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 164 QDAEGDHRPRALDHQDQDHRSPREEV 87
QD G+ + D D DHRS +EEV
Sbjct: 225 QDPHGEFFIKRQDDGDLDHRSSQEEV 250
>At2g34790.1 68415.m04272 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 532
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = -3
Query: 224 GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQD 111
G V + RH++W + Y Q + R ++++D D
Sbjct: 446 GKVSEERHMKWIREMYSYMEQYVSKNPRQAYVNYRDLD 483
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240: Ubiquitin
family
Length = 1919
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 224 GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALD 126
G QH H+R H PRYR + +P +D
Sbjct: 1400 GACGQHGHMRTNKHCPRYRENT---ESQPEGID 1429
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,525,202
Number of Sequences: 28952
Number of extensions: 164228
Number of successful extensions: 747
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 537681456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -