Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30838
         (686 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6LF19 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  

>UniRef50_Q6LF19 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 337

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 22/75 (29%), Positives = 35/75 (46%)
 Frame = +2

Query: 209 VKFTFYLFLFFKSNFIRFL*SHYPFVFNYHSLFLSETILLQSLQNSVKREPADIQDVFIQ 388
           +KF   LF FF S ++    ++Y F+ N H+ F S    L S+ +    +       +  
Sbjct: 202 IKFHSLLFAFFSSYYLGLQIANYYFINNIHN-FFSSFFFLTSISSIYLADYYIWASYYFL 260

Query: 389 SQFIRIFLLFAQFNL 433
           S    IFLLF  +N+
Sbjct: 261 SFNYFIFLLFNYYNM 275


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,449,128
Number of Sequences: 1657284
Number of extensions: 9452494
Number of successful extensions: 18722
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 18210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18716
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)