Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30837
         (800 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6L418 Cluster: Putative uncharacterized protein; n=1; ...    34   4.8  
UniRef50_Q0IDH7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  

>UniRef50_Q6L418 Cluster: Putative uncharacterized protein; n=1;
           Solanum demissum|Rep: Putative uncharacterized protein -
           Solanum demissum (Wild potato)
          Length = 674

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 635 KRNFHHLTIDKLIWRFPCVPRKIVFFFKTFSSYIKYIEPRG 757
           K+  ++LT DK++W +   P   V +  TF S+I  +  RG
Sbjct: 324 KKYLNNLTADKIVWNYHWFPSAEVIYMSTFRSFIVLMGLRG 364


>UniRef50_Q0IDH7 Cluster: Putative uncharacterized protein; n=1;
           Synechococcus sp. CC9311|Rep: Putative uncharacterized
           protein - Synechococcus sp. (strain CC9311)
          Length = 299

 Score = 33.5 bits (73), Expect = 6.3
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 442 KEVVTLFWCLKALRRVRRSHALLPAEPSTCPGLPLGLLEVAIE 570
           +EVV L WCL A  R  +  A+L  EP    G+ +GL  ++++
Sbjct: 113 QEVVLLVWCLNAQLRSSKGSAVLLPEPVRELGVKIGLRNLSVQ 155


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,496,242
Number of Sequences: 1657284
Number of extensions: 10764643
Number of successful extensions: 21640
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21634
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)