Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30837
         (800 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.7  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   6.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   6.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 85   AKEFFFFFVLEHYTQKI*SLILSMIVNEHTVTLQLYYLHLKFLS 216
            AK +FF+ V  +   K   LI  +  NEH +  ++    L+ L+
Sbjct: 1025 AKIYFFYLVKFYKVSKSGELIHKIETNEHEIIDKIEMFSLQILN 1068


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 85  AKEFFFFFVLEHYTQKI*SLILSMIVNEHTVTLQLYYLHLKFLS 216
           AK +FF+ V  +   K   LI  +  NEH +  ++    L+ L+
Sbjct: 306 AKIYFFYLVKFYKVSKSGELIHKIETNEHEIIDKIEMFSLQILN 349


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +1

Query: 97  FFFFVLEHYTQKI*SLILSMIVNEHTVTLQLYY 195
           F  F+L+H   K+   + ++++N H   L  +Y
Sbjct: 598 FVAFLLKHIVPKLQLCMQNLVINPHQQHLDAWY 630


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 395 NN*FELINKLPLFINKQLTICVFKYIDICILFI*CVLFY 279
           N   E+I+KL    NK   + ++K      +FI C LF+
Sbjct: 102 NKLIEVISKLHKLDNKLKHMLIWKSYKRTQIFITCELFF 140


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 522 FYLSWVATRPLRGRY 566
           +Y SW A RP  G++
Sbjct: 26  YYASWGANRPGNGKF 40


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 607 KNYESTPYDQTKFPPP 654
           +NY   P   T +PPP
Sbjct: 201 RNYGPEPVPSTPYPPP 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,406
Number of Sequences: 336
Number of extensions: 3095
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)