Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30835
         (547 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    57   1e-10
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    55   4e-10
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   1.7  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            22   3.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   3.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.0  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.0  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   7.0  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.3  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   9.3  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 56.8 bits (131), Expect = 1e-10
 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 7/161 (4%)
 Frame = +2

Query: 11  DKRLDMFELDSFMYKLVNGKNTIVRSSMDMQGFIPEYLSTRRVMESEMMPSGDGQTMVKD 190
           D+++   ELD F   L  G+NTI R+S      IP +  T R ++    P G G+ + + 
Sbjct: 519 DQKIMFIELDKFTVNLKQGQNTITRASSQSSVTIP-FERTFRNLDLN-RPQG-GEELAQF 575

Query: 191 WWCKSRNGFPQRLMLPLGTIGGLEMQMYVIVSPVRTGMLLPTLD--MTMMKDRCACRWSS 364
            +C    G+PQ +++P GT  G++ Q++V++S      +  + +         C  +   
Sbjct: 576 NFCGC--GWPQHMLIPKGTPEGMKSQLFVMISNYDDDKIDQSTEGVCNDAGSYCGIKDKL 633

Query: 365 CISTMPLGYPFDR----PID-MASFFTSNMKFADVMIYRKD 472
                 +GYPFDR     +D +  F T NM+  DV I   D
Sbjct: 634 YPDRRSMGYPFDRMPRNGVDTLQQFLTPNMRVQDVTIKFSD 674


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 55.2 bits (127), Expect = 4e-10
 Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
 Frame = +2

Query: 23  DMF-ELDSFMYKLVNGKNTIVRSSMDMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWWC 199
           DMF ELD F   L  G NTI R S +    IP +  T R +++     GD  +      C
Sbjct: 521 DMFIELDRFAVSLKQGTNTITRHSTESSLTIP-FERTFRNLDANRPTGGDALSEFNFCGC 579

Query: 200 KSRNGFPQRLMLPLGTIGGLEMQMYVIVSPVRTGMLLPTLDMTMMKDRCACRWSSCI--S 373
               G+PQ ++LP GT  G    ++V++S      +      T       C     +   
Sbjct: 580 ----GWPQHMLLPKGTEAGYPCHLFVMISNYADDRVEQDTSGTCSDGDTFCGIKDKLYPD 635

Query: 374 TMPLGYPFDR-PID----MASFFTSNMKFADVMI 460
              +GYPFDR P D    +  F T NM+  +V+I
Sbjct: 636 RRSMGYPFDRMPRDGVDTLQQFLTPNMRVQEVVI 669


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 346 TTVLHHGHVQCGQEHTGADRRHD 278
           T+  HH +   G  HTG    HD
Sbjct: 39  TSYQHHFNSPAGNAHTGPTGTHD 61


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 371 STMPLGYPFDRPIDMAS 421
           +T P GYP D P  M S
Sbjct: 91  NTPPAGYPMDVPHGMGS 107


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 371 STMPLGYPFDRPIDMAS 421
           +T P GYP D P  M S
Sbjct: 91  NTPPAGYPMDVPHGMGS 107


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 359 SSDKHNGPSSWSCPMWARAYRCGPA 285
           S  ++ G ++  CP    A R GPA
Sbjct: 281 SQRRYTGRATCDCPNCQEAERLGPA 305


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 103 RIYPRVPFDSSCNG 144
           R+YP VPF S  +G
Sbjct: 357 RLYPSVPFISRVSG 370


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 103 RIYPRVPFDSSCNG 144
           R+YP VPF S  +G
Sbjct: 357 RLYPSVPFISRVSG 370


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 6    STTNASTCSSWTALCTNWSTERTPSSVAP 92
            STT+ ST +SW    T    E  P+   P
Sbjct: 1348 STTSVSTTTSWNPGSTTNYPEWQPTEWHP 1376


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 165 EMARQWSRTGGASLATDSLRDL 230
           E+A+ W +T    L T+ ++DL
Sbjct: 19  EVAQVWEQTLQKGLDTEEIKDL 40


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -3

Query: 338 PSSWSCPMW 312
           PS W+CP +
Sbjct: 49  PSDWNCPQY 57


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -3

Query: 338 PSSWSCPMW 312
           PS W+CP +
Sbjct: 40  PSDWNCPQY 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,482
Number of Sequences: 336
Number of extensions: 3058
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)