Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30835
(547 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 30 1.2
AC006733-8|AAF60490.1| 600|Caenorhabditis elegans Hypothetical ... 30 1.2
U50312-10|AAY86208.1| 356|Caenorhabditis elegans Hypothetical p... 28 3.8
U23169-3|AAV58882.1| 284|Caenorhabditis elegans Regulator of g ... 28 3.8
U23169-2|AAM98050.1| 290|Caenorhabditis elegans Regulator of g ... 28 3.8
U23169-1|AAL02450.1| 363|Caenorhabditis elegans Regulator of g ... 28 3.8
Z46937-5|CAA87057.1| 376|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z46937-2|CAB60996.1| 444|Caenorhabditis elegans Hypothetical pr... 28 5.0
U27124-1|AAA73482.1| 376|Caenorhabditis elegans MPK-1 protein. 28 5.0
U03879-1|AAA18956.1| 444|Caenorhabditis elegans Sur-1 MAP kinas... 28 5.0
Z81034-3|CAB02728.1| 289|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81034-2|CAB02727.1| 213|Caenorhabditis elegans Hypothetical pr... 27 8.8
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 27 8.8
U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily a... 27 8.8
>U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical
protein T27F7.1 protein.
Length = 208
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 68 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMPSGDGQTMVKD 190
K+T V SM +PE + T R M +EMM G + M+++
Sbjct: 104 KSTEVMKSMQQLVKVPEIMKTMREMSAEMMKLGIIEEMIEE 144
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 29.9 bits (64), Expect = 1.2
Identities = 28/106 (26%), Positives = 32/106 (30%), Gaps = 2/106 (1%)
Frame = -1
Query: 541 GEIVLHHDHLRGVHGLAGVRHA--EVFSVDHYVSELHVASEEARHVNRSVKWISERHGGD 368
GE HH H G H A H E H+ H E H E H
Sbjct: 420 GEHGTHHGH-HGEHHHAPAHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHGHHGEHHHAP 478
Query: 367 T*APATSTTVLHHGHVQCGQEHTGADRRHDDVHLHLQTSNRTEGQH 230
HHGH G H+ A H H H + G+H
Sbjct: 479 AHHGHHGEHGTHHGHH--GSHHSPAHHGHHGEHHHAPAHHGHHGEH 522
Score = 29.5 bits (63), Expect = 1.7
Identities = 28/104 (26%), Positives = 33/104 (31%), Gaps = 3/104 (2%)
Frame = -1
Query: 526 HHDHLRGVHGLAGVRHAEVFSVDHYVSELHVASEEARHVNRSVKWISERHGGDT*-APAT 350
HH H G HG H S H+ A H + H G+ APA
Sbjct: 480 HHGH-HGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAH 538
Query: 349 STTVLHHG--HVQCGQEHTGADRRHDDVHLHLQTSNRTEGQHKS 224
HG H G H+ A H H H + G H S
Sbjct: 539 HGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHHGS 582
Score = 29.1 bits (62), Expect = 2.2
Identities = 28/106 (26%), Positives = 35/106 (33%)
Frame = +1
Query: 223 ETYAAPRYDWRFGDADVRHRVAGPHRYALAHIGHDHDEGPLCLSLELMYLHHASRISI*Q 402
E + AP + G+ H G H +A AH GH + G + HH S S
Sbjct: 508 EHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHG-------THHGHHGSHHSPAH 560
Query: 403 TD*HGELLH*QHEVR*RNDLQKRPRHVEHQQDRGHLGDGHDEGRSH 540
HGE H H H + GH GH H
Sbjct: 561 HGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGH---GHHAPAHH 603
>AC006733-8|AAF60490.1| 600|Caenorhabditis elegans Hypothetical
protein Y32H12A.7 protein.
Length = 600
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 377 WWRYMSSSDKHNGPSSWSCPMWARAYR 297
WWRY+ S +H+GP+ WA R
Sbjct: 120 WWRYLLWSLQHSGPTFIKLGQWASTRR 146
>U50312-10|AAY86208.1| 356|Caenorhabditis elegans Hypothetical
protein B0222.11 protein.
Length = 356
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 308 LPTLDMTMMKDRCACRWSSCISTMPLGYPFDRPIDMASFFTSNMKFADVMIYRKDLGMSN 487
L T T +C C + ST P P+D + AS + + F D+ I R++ +
Sbjct: 37 LITQSTTPASPKCQCLPPTTPSTPPNCIPYDSRLQAASLEEAIVAFPDLTITRQEKTQQS 96
Query: 488 TS 493
T+
Sbjct: 97 TA 98
>U23169-3|AAV58882.1| 284|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform c protein.
Length = 284
Score = 28.3 bits (60), Expect = 3.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 68 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 160
+N + ++DM+ F P RR++E++ P
Sbjct: 104 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 134
>U23169-2|AAM98050.1| 290|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform b protein.
Length = 290
Score = 28.3 bits (60), Expect = 3.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 68 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 160
+N + ++DM+ F P RR++E++ P
Sbjct: 110 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 140
>U23169-1|AAL02450.1| 363|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform a protein.
Length = 363
Score = 28.3 bits (60), Expect = 3.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 68 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 160
+N + ++DM+ F P RR++E++ P
Sbjct: 183 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 213
>Z46937-5|CAA87057.1| 376|Caenorhabditis elegans Hypothetical
protein F43C1.2a protein.
Length = 376
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 95 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW 196
D GF+ EY++TR E+M + G T D W
Sbjct: 182 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVW 215
>Z46937-2|CAB60996.1| 444|Caenorhabditis elegans Hypothetical
protein F43C1.2b protein.
Length = 444
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 95 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW 196
D GF+ EY++TR E+M + G T D W
Sbjct: 250 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVW 283
>U27124-1|AAA73482.1| 376|Caenorhabditis elegans MPK-1 protein.
Length = 376
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 95 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW 196
D GF+ EY++TR E+M + G T D W
Sbjct: 182 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVW 215
>U03879-1|AAA18956.1| 444|Caenorhabditis elegans Sur-1 MAP kinase
protein.
Length = 444
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 95 DMQGFIPEYLSTRRVMESEMMPSGDGQTMVKDWW 196
D GF+ EY++TR E+M + G T D W
Sbjct: 250 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDVW 283
>Z81034-3|CAB02728.1| 289|Caenorhabditis elegans Hypothetical
protein C15C6.2b protein.
Length = 289
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 347 HNGPSSWSCPMWARAYRCGPATR*RTSASPNL 252
HN W+C + A +C P+T R S N+
Sbjct: 127 HNDVHKWTCAIMRAAGKCLPSTEPRDDGSLNV 158
>Z81034-2|CAB02727.1| 213|Caenorhabditis elegans Hypothetical
protein C15C6.2a protein.
Length = 213
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 347 HNGPSSWSCPMWARAYRCGPATR*RTSASPNL 252
HN W+C + A +C P+T R S N+
Sbjct: 127 HNDVHKWTCAIMRAAGKCLPSTEPRDDGSLNV 158
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +2
Query: 11 DKRLDMFELDSFMYKLVNGKNTIVRSSMDMQG 106
D+++ +F+ F YK+V+GK ++++ D+ G
Sbjct: 2785 DEQIKLFKRKKF-YKIVDGKRVLIKTEGDVPG 2815
>U40959-4|AAA81768.1| 112|Caenorhabditis elegans Hypothetical
protein B0310.4 protein.
Length = 112
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/78 (23%), Positives = 24/78 (30%)
Frame = -1
Query: 517 HLRGVHGLAGVRHAEVFSVDHYVSELHVASEEARHVNRSVKWISERHGGDT*APATSTTV 338
+ RG E + + E H +R E H G+T T
Sbjct: 5 YYRGESHRGETHRGETHRGETHRGETHRGKTHRGETHRGETHRGETHRGETHRGETHRGK 64
Query: 337 LHHGHVQCGQEHTGADRR 284
H G G+ H G RR
Sbjct: 65 THRGETHRGETHRGETRR 82
>AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily
assigned gene nameprotein 196 protein.
Length = 477
Score = 27.1 bits (57), Expect = 8.8
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -1
Query: 103 LHIHGATDDGVLSVDQFVHKAVQLEHVEAFVV 8
+HI ++ ++D+F H+ +QL H ++ V
Sbjct: 123 VHIRNCEEEFTRNIDKFDHRKIQLTHDDSITV 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,110,481
Number of Sequences: 27780
Number of extensions: 296415
Number of successful extensions: 916
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -