Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30831
         (724 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g41790.1 68415.m05165 peptidase M16 family protein / insulina...    29   3.1  
At4g09760.3 68417.m01604 choline kinase, putative similar to GmC...    27   9.5  

>At2g41790.1 68415.m05165 peptidase M16 family protein / insulinase
           family protein contains Pfam domain, PF05193: Peptidase
           M16 inactive domain; similar to insulin-degrading enzyme
           (Insulysin, Insulinase, Insulin protease) [Mouse]
           SWISS-PROT:Q9JHR7
          Length = 970

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -3

Query: 332 EHVQNILYLLIRNNQSCLEKTFCQNVFPHALILCISQYNMSDMV--SSLLLDVTN 174
           EH+Q IL LL    Q   +   CQ +F     +C ++++  D +   S ++D+ +
Sbjct: 346 EHMQEILGLLFNYIQLLQQTGVCQWIFDELSAICETKFHYQDKIPPMSYIVDIAS 400


>At4g09760.3 68417.m01604 choline kinase, putative similar to GmCK2p
           choline kinase gi|1438881|gb|AAC49375
          Length = 255

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = -3

Query: 359 NTDNSFSQVEHVQNILYLLIRNNQSCLEKTFCQNVFPHALILCISQYNMSDMVSSLLLDV 180
           +T+     +E   N+L   + N Q   E  FC N   +  I+   + N   ++ SLLL  
Sbjct: 174 STEFGLDDIEDEINLLEQEVNNEQ---EIGFCHNDLQYGNIMIDEETNAITIIVSLLLIT 230

Query: 179 TNV 171
           TN+
Sbjct: 231 TNL 233


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,366,577
Number of Sequences: 28952
Number of extensions: 247680
Number of successful extensions: 470
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)