Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30824
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    24   1.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   3.8  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   5.0  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   5.0  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   5.0  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   5.0  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   5.0  
AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase l...    22   5.0  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 122 RRAPSQPQPWPAYEQPHRISCRP 54
           ++  SQP  WPA+    R S RP
Sbjct: 181 KKTESQPMLWPAWVYCTRYSDRP 203


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 359 ELVAEKEKYKDIGDD 403
           +LV EKE+ K++ DD
Sbjct: 212 KLVVEKEREKELSDD 226


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 614 IDNKLVYSKINTTMFVWIF 558
           ID+K+V S+ NTT+ + +F
Sbjct: 163 IDSKVVDSRKNTTVSIDVF 181


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 131 HAPRRAPSQPQPW 93
           H   +AP  PQPW
Sbjct: 39  HLRFKAPQAPQPW 51


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 131 HAPRRAPSQPQPW 93
           H   +AP  PQPW
Sbjct: 41  HLRFKAPQAPQPW 53


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 131 HAPRRAPSQPQPW 93
           H   +AP  PQPW
Sbjct: 39  HLRFKAPQAPQPW 51


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 131 HAPRRAPSQPQPW 93
           H   +AP  PQPW
Sbjct: 41  HLRFKAPQAPQPW 53


>AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase like
           protein E2 protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 131 HAPRRAPSQPQPW 93
           H   +AP  PQPW
Sbjct: 13  HLRFKAPQAPQPW 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,023
Number of Sequences: 336
Number of extensions: 2565
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)