Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30824
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    32   0.018
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.66 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   0.66 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    26   0.88 
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   2.0  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.0  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    24   4.7  
AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          23   6.2  
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     23   6.2  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   8.2  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 31.9 bits (69), Expect = 0.018
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 224 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHA 126
           P PL + E + C+QR+ A P+A R  IRR   A
Sbjct: 842 PHPLLIKEDARCHQRYLADPEASRAVIRREERA 874


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.6 bits (56), Expect = 0.66
 Identities = 15/69 (21%), Positives = 31/69 (44%)
 Frame = +2

Query: 158  ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQKLQK 337
            +LEEE   +   L+ ++++ EKA++     K +I  L  R              +Q ++ 
Sbjct: 960  QLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQTIET 1019

Query: 338  EVDRLEDEL 364
            ++   +D L
Sbjct: 1020 KLQETKDTL 1028


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.6 bits (56), Expect = 0.66
 Identities = 20/126 (15%), Positives = 51/126 (40%)
 Frame = +2

Query: 26   LKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSL 205
            LK ++  +EE+ K + +  +    ++ ++            + V+LEE++  +   L  +
Sbjct: 796  LKRSKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEV 855

Query: 206  EVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQKLQKEVDRLEDELVAEKEKY 385
              + ++        K QIK    ++               KL K+ D L+ E+  ++ + 
Sbjct: 856  SGTTDEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELKLEIKKKENEI 915

Query: 386  KDIGDD 403
              + ++
Sbjct: 916  TKVRNE 921


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
 Frame = +2

Query: 182 VGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSV-------QKLQKE 340
           +  N K +E  + +A +R+E+  + IKT    L+            V        +LQ E
Sbjct: 427 IEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQSE 486

Query: 341 VDRLEDEL-VAEKEKYKDIGDDLDTAFVELILKE*ASVIQRL 463
           +D + ++L  A+ +K++D         VEL   E   V  R+
Sbjct: 487 LDNVREQLGDAKIDKHEDARRKKKQEVVELFKLEVPGVYDRM 528


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 194 LKSLEVSEEKANQREEEYKNQIKTLTTRLK 283
           LKS +   +KA+QR +E K  IKT    +K
Sbjct: 219 LKSADGDVQKAHQRIDEGKRTIKTYEALVK 248


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
 Frame = +2

Query: 149 KIVELEEELRVVGNNLKSLEVSEEKANQREEE-----------YKNQIKTLTTRLKXXXX 295
           K+ ++ E LR + + LK+LE  +E+ ++ ++            Y+ ++K    +L+    
Sbjct: 185 KLEKISEYLRTIEDRLKTLEEEKEELSEYQKWDKARRTLEYVIYETELKETRKQLEELDG 244

Query: 296 XXXXXXXS----VQKLQKEVDRLEDELVAEKEKYKDI 394
                        Q++QK  DRL++   A K+  KD+
Sbjct: 245 QRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDV 281


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -2

Query: 483 CQGTQTSSLCI 451
           CQGT  SSLCI
Sbjct: 249 CQGTNRSSLCI 259


>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = +2

Query: 206 EVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQKLQKEVDRLED 358
           ++ ++   Q E+E++    TL  +L              + LQK++D L D
Sbjct: 99  QLLDDAQRQMEQEHRQYAATLEEQLHAAQQETQQEQEMKKALQKQLDALTD 149


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 239 EEYKNQIKTLTTRLKXXXXXXXXXXXSVQKLQKEVDRLEDELVAEK--EKYK 388
           E++KN  +++ + L             V+K+ K+VD L  +L+  K  + YK
Sbjct: 463 EKFKNICESIISELLPLQKPAVEVEKVVKKVSKDVDMLFGDLLKNKGAQNYK 514


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +3

Query: 210  SQRRRPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSVPCRNCKRRS 344
            ++   PT      ++ S P PP+  R + +P SP       +RR+
Sbjct: 1088 NEAAEPTGEVEEEEV-SPPVPPIPPRSRRLPPSPRTTEMRRRRRN 1131


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,617
Number of Sequences: 2352
Number of extensions: 9997
Number of successful extensions: 44
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)