Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30824
(640 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 33 0.12
At3g02930.1 68416.m00288 expressed protein ; expression support... 33 0.12
At1g47900.1 68414.m05334 expressed protein 33 0.12
At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyo... 33 0.16
At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyo... 33 0.16
At5g54480.1 68418.m06784 hypothetical protein 32 0.37
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 31 0.65
At3g43583.1 68416.m04636 hypothetical protein 31 0.65
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 30 1.1
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 29 2.0
At4g33200.1 68417.m04727 myosin, putative similar to myosin (GI:... 29 2.6
At4g02710.1 68417.m00366 kinase interacting family protein simil... 29 2.6
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 29 2.6
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi... 28 4.5
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 28 4.5
At3g24390.1 68416.m03063 Ulp1 protease family protein contains P... 28 4.5
At3g02350.1 68416.m00218 glycosyl transferase family 8 protein c... 28 4.5
At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyo... 28 4.5
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 28 6.0
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 28 6.0
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 28 6.0
At1g69710.1 68414.m08022 zinc finger protein, putative / regulat... 28 6.0
At1g68790.1 68414.m07863 expressed protein 28 6.0
At5g61560.1 68418.m07725 protein kinase family protein contains ... 27 7.9
At5g28490.1 68418.m03466 expressed protein contains Pfam profile... 27 7.9
At5g17870.1 68418.m02095 plastid-specific ribosomal protein-rela... 27 7.9
At5g07660.1 68418.m00877 structural maintenance of chromosomes (... 27 7.9
At4g30710.2 68417.m04353 expressed protein contains Pfam domain,... 27 7.9
At4g30710.1 68417.m04352 expressed protein contains Pfam domain,... 27 7.9
At3g60380.1 68416.m06753 expressed protein 27 7.9
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 33.5 bits (73), Expect = 0.12
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 2/123 (1%)
Frame = +2
Query: 32 EARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNN--LKSL 205
E L E + K+ E A K+A + + +E +++ +N LK
Sbjct: 248 ETYMLKELSHLKWQEKATKMAYEDTVAKITEQRDSLQNLENSLKDERVKMDESNEELKKF 307
Query: 206 EVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQKLQKEVDRLEDELVAEKEKY 385
E EK +R+E N+++ + K ++ +++++ +LED+L + K
Sbjct: 308 ESVHEKHKKRQEVLDNELRACKEKFKEFERQDVKHREDLKHVKQKIKKLEDKLEKDSSKI 367
Query: 386 KDI 394
D+
Sbjct: 368 GDM 370
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 33.5 bits (73), Expect = 0.12
Identities = 23/113 (20%), Positives = 51/113 (45%)
Frame = +2
Query: 71 DEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLEVSEEKANQREEEYK 250
+E+A KL DL K+ ELE + + +L++ +++E A+ +E++
Sbjct: 253 NEIALKLGAEIVDLKRDLENARSLEAKVKELEMIIEQLNVDLEAAKMAESYAHGFADEWQ 312
Query: 251 NQIKTLTTRLKXXXXXXXXXXXSVQKLQKEVDRLEDELVAEKEKYKDIGDDLD 409
N+ K L RL+ S+ + K+++ L + + D+ + ++
Sbjct: 313 NKAKELEKRLEEANKLEKCASVSLVSVTKQLEVSNSRLHDMESEITDLKEKIE 365
Score = 32.7 bits (71), Expect = 0.21
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Frame = +2
Query: 17 RNQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNL 196
+N+ KE EEA+K + L V L +I +L+E++ ++ +
Sbjct: 312 QNKAKELEKRLEEANKLEKCASVSLVSVTKQLEVSNSRLHDMESEITDLKEKIELLEMTV 371
Query: 197 KSLEVSEEKANQR----EEE----------YKNQIKTLTTRLKXXXXXXXXXXXSVQKLQ 334
S +V EK+ Q+ EEE KN+++T+ SVQ+L
Sbjct: 372 ASQKVDLEKSEQKLGIAEEESSKSEKEAEKLKNELETVNEEKTQALKKEQDATSSVQRLL 431
Query: 335 KEVDRLEDELVAEKEK 382
+E ++ EL + KE+
Sbjct: 432 EEKKKILSELESSKEE 447
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 20 NQLKEARFLAEEADKKYDEV--ARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNN 193
+QLKEAR AEEA +K DE A+K ++ ++ + EEEL+ N
Sbjct: 115 DQLKEARKEAEEASEKLDEALEAQKKSLENFEI-EKFEVVEAGIEAVQRKEEELKKELEN 173
Query: 194 LKSLEVSE 217
+K+ SE
Sbjct: 174 VKNQHASE 181
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 161 LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQKLQKE 340
LEE+++ +K +V + + E Y+ Q+K ++ VQKL ++
Sbjct: 55 LEEQIKSYDVQIKGYDVQVKTYENQVESYEEQVKDFEEQIDAYDEKVHEYEEQVQKLNED 114
Query: 341 VDRLEDEL-VAEKE 379
V+ L ++L VA +E
Sbjct: 115 VEDLNEKLSVANEE 128
>At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/93 (19%), Positives = 39/93 (41%)
Frame = +2
Query: 149 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQK 328
K+V E+E++++ L +E E + E KNQ+ + + V +
Sbjct: 164 KLVAKEDEIKMLKARLYDMEKEHESLGKENESLKNQLSDSASEISNVKANEDEMVSKVSR 223
Query: 329 LQKEVDRLEDELVAEKEKYKDIGDDLDTAFVEL 427
+ +E++ + KEK + + + D E+
Sbjct: 224 IGEELEESRAKTAHLKEKLESMEEAKDALEAEM 256
>At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/93 (19%), Positives = 39/93 (41%)
Frame = +2
Query: 149 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQK 328
K+V E+E++++ L +E E + E KNQ+ + + V +
Sbjct: 164 KLVAKEDEIKMLKARLYDMEKEHESLGKENESLKNQLSDSASEISNVKANEDEMVSKVSR 223
Query: 329 LQKEVDRLEDELVAEKEKYKDIGDDLDTAFVEL 427
+ +E++ + KEK + + + D E+
Sbjct: 224 IGEELEESRAKTAHLKEKLESMEEAKDALEAEM 256
>At5g54480.1 68418.m06784 hypothetical protein
Length = 720
Score = 31.9 bits (69), Expect = 0.37
Identities = 24/97 (24%), Positives = 46/97 (47%)
Frame = +2
Query: 149 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQK 328
K++ + EE+R+ L +V EEK R E +++ T L+ S
Sbjct: 598 KVLSVVEEMRLRFQGLGFKQVEEEKQRMRTERLSKELEKKTKELEEIRGTRGSSPTS-NM 656
Query: 329 LQKEVDRLEDELVAEKEKYKDIGDDLDTAFVELILKE 439
++ E+ L + + E EK++ + +L+ A V + L+E
Sbjct: 657 VEPELLFLRESVTQETEKHERLIRELNDA-VSMSLQE 692
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 31.1 bits (67), Expect = 0.65
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 6/129 (4%)
Frame = +2
Query: 23 QLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKS 202
QL+EA L A + V ++L L +IV LE V +
Sbjct: 332 QLEEANKLERSASVSLESVMKQLEGSNDKLHDTETEITDLKERIVTLET---TVAKQKED 388
Query: 203 LEVSEEKANQREEEY-KN--QIKTLTTRLKXXXXXXXXXXXSVQKLQKEVDRLEDE---L 364
LEVSE++ EEE KN +++ L + L+ Q V RL +E L
Sbjct: 389 LEVSEQRLGSVEEEVSKNEKEVEKLKSELETVKEEKNRALKKEQDATSRVQRLSEEKSKL 448
Query: 365 VAEKEKYKD 391
+++ E K+
Sbjct: 449 LSDLESSKE 457
>At3g43583.1 68416.m04636 hypothetical protein
Length = 100
Score = 31.1 bits (67), Expect = 0.65
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 170 PPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQP 75
PP + F R+ H P P P+P P+ E P
Sbjct: 7 PPHCRGFHCHRSNHRPPEKPPSPEPPPSPEPP 38
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/89 (24%), Positives = 40/89 (44%)
Frame = +2
Query: 161 LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQKLQKE 340
+++EL V + LK V + + E +++T L+ +V L KE
Sbjct: 520 VKDELEGVTHELKESSVKNQSLQKELVEIYKKVETSNKELEEEKK-------TVLSLNKE 572
Query: 341 VDRLEDELVAEKEKYKDIGDDLDTAFVEL 427
V +E +++ E+E K + DL+ A L
Sbjct: 573 VKGMEKQILMEREARKSLETDLEEAVKSL 601
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 29.5 bits (63), Expect = 2.0
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Frame = +2
Query: 161 LEEELRVVGN-NLKSL--EVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQKL 331
+EE++R+ N ++SL E+SEEK + E + + TL RL+ S +
Sbjct: 1026 VEEKIRLYKNIQIESLSKEMSEEK--KELESCRLECVTLADRLRCSEENAKQDKESSLEK 1083
Query: 332 QKEVDRLEDEL----VAEKEKYKDIGDDLD 409
E+DRL DEL K+ + + D+D
Sbjct: 1084 SLEIDRLGDELRSADAVSKQSQEVLKSDID 1113
>At4g33200.1 68417.m04727 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]
Length = 1522
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +2
Query: 152 IVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQKL 331
+VEL+++ ++ N++ SLE + K +LK SVQ L
Sbjct: 980 MVELKKDNALLKNSMNSLEKKNRVLEKELLNAKTNCNNTLQKLKEAEKRCSELQTSVQSL 1039
Query: 332 QKEVDRLEDE 361
++++ LE+E
Sbjct: 1040 EEKLSHLENE 1049
>At4g02710.1 68417.m00366 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/80 (27%), Positives = 30/80 (37%)
Frame = +2
Query: 29 KEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLKSLE 208
KEA A +A+ + + R LA E D I LEE LR + + +
Sbjct: 310 KEAGERASKAETETLALKRSLAKAETDKETALIQYRQCLNTISNLEERLRKAEEDARLIN 369
Query: 209 VSEEKANQREEEYKNQIKTL 268
EKA E K + L
Sbjct: 370 ERAEKAGVEVENLKQTVSKL 389
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 29.1 bits (62), Expect = 2.6
Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 1/136 (0%)
Frame = +2
Query: 20 NQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNLK 199
+QL++ L EEA K ++ + ++E +L + +K
Sbjct: 376 SQLQDYFRLKEEAGMKTIKLRDEHEVLERQRRTDLEALRNLEENYQQLINRKNDLDEQIK 435
Query: 200 SLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQKLQKEVDRLEDELV-AEK 376
+ + + +YKN+ +L T L+ + KL+ + LED+L
Sbjct: 436 RFKDRQGEIETSSSKYKNETTSLKTELRALQEKHVNAREASAKLKTRIAELEDQLSDLTA 495
Query: 377 EKYKDIGDDLDTAFVE 424
E+Y++ D T VE
Sbjct: 496 ERYENERDSRLTQAVE 511
>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
to proline-rich protein [Arabidopsis thaliana]
gi|6782442|gb|AAF28388; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 448
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = -3
Query: 227 WPSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHAPRRAP--SQPQPWPAYEQPHRISCRP 54
WP P +LP G PP + + P+ +P P P P YE P + P
Sbjct: 151 WPMP-KLPPFKGFDHPFPLPPPLELPPFLKKPCPPKYSPPVEVPPPVPVYEPPPKKEIPP 209
Query: 53 P 51
P
Sbjct: 210 P 210
>At4g14760.1 68417.m02271 M protein repeat-containing protein contains
Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 28.3 bits (60), Expect = 4.5
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = +2
Query: 149 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQK 328
++ ++EE+L V+ LEV + + +Q++ L L S +
Sbjct: 694 QLCKVEEKLGVLEKKYTELEVRYTDLQRDNKLKSHQVEELQVSLAAEKQESANYKRSTES 753
Query: 329 ----LQKEVDRLEDELVAEKEKYKDIGDDLDTAFVELILKE*ASVIQRLE 466
LQK V L +E + K +Y+D D + VE+ + + +I+ LE
Sbjct: 754 RLADLQKNVSFLREECRSRKREYEDELDRVVNKQVEIFILQ--KLIEDLE 801
>At3g24390.1 68416.m03063 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At4g05280,
At1g25886, At4g03300
Length = 1139
Score = 28.3 bits (60), Expect = 4.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 182 RHGAPPQAQRFWIRRTRHAPRRAPSQP 102
+ PPQ + +++R R+AP +P +P
Sbjct: 407 KQSRPPQLEETYVKRKRNAPGPSPKEP 433
>At3g02350.1 68416.m00218 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 561
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 594 FENKYHHVCMDFHNLKVRNTKY 529
FEN+ + D HNLK +N KY
Sbjct: 340 FENQAENATKDSHNLKFKNPKY 361
>At1g78430.1 68414.m09139 tropomyosin-related similar to Tropomyosin
1 [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae};
similar to enterophilin-2L (GI:12718845) [Cavia
porcellus]; similar to latent nuclear antigen
(GI:5669894) [Human herpesvirus 8]; similar to multiple
ligand-binding protein 1 (GI:1403575) [Streptococcus
sp.]
Length = 326
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +2
Query: 17 RNQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXXKIVELEEELRVVGNNL 196
++QLK+ A K DE+A K++ + +L K+ +EE + +
Sbjct: 186 KDQLKKTDTEMSCAKAKEDEIASKVSQIGEELEESNETTAKLKKKLESVEEAKETLEAEM 245
Query: 197 KSLEVSEEK 223
K L+V E+
Sbjct: 246 KKLKVQTEQ 254
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Frame = -3
Query: 188 YQRHGAPPQAQRFWIRRTRHAPRRAPS-------QPQPWPAYEQPHRISCRPPQRGTWLP 30
Y P +++ + H P + P+ QP P P++ + +P R T++P
Sbjct: 818 YDNQYQQPYTDSYYVPQVSHPPMQQPTMFMPHQAQPAPQPSFTPAPTSNAQPSMRTTFVP 877
Query: 29 S 27
S
Sbjct: 878 S 878
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Frame = -3
Query: 188 YQRHGAPPQAQRFWIRRTRHAPRRAPS-------QPQPWPAYEQPHRISCRPPQRGTWLP 30
Y P +++ + H P + P+ QP P P++ + +P R T++P
Sbjct: 820 YDNQYQQPYTDSYYVPQVSHPPMQQPTMFMPHQAQPAPQPSFTPAPTSNAQPSMRTTFVP 879
Query: 29 S 27
S
Sbjct: 880 S 880
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/86 (22%), Positives = 37/86 (43%)
Frame = +2
Query: 158 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQKLQK 337
E+EE R ++ EE+A +REE + + + R + +K ++
Sbjct: 431 EIEERKRREEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKREEEEARKREE 490
Query: 338 EVDRLEDELVAEKEKYKDIGDDLDTA 415
E R E+E +E+ K ++ + A
Sbjct: 491 ERKREEEEAKRREEERKKREEEAEQA 516
>At1g69710.1 68414.m08022 zinc finger protein, putative / regulator of
chromosome condensation (RCC1) family protein similar to
zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1028
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = +2
Query: 149 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQK 328
K +LEEEL LK + + K I++LTT+LK S+
Sbjct: 859 KAHQLEEELEKTKRQLKVVTAMAADEAEENRSAKEVIRSLTTQLK-EMAEKQSQKDSIST 917
Query: 329 LQKEVDRLEDELVAE 373
K D+ + E V +
Sbjct: 918 NSKHTDKEKSETVTQ 932
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 27.9 bits (59), Expect = 6.0
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +2
Query: 149 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQK 328
K E+E+ + + + L E ++EE K + K L RLK +K
Sbjct: 385 KKAEIEQLQVEISHKEEKLAKREAALEKKEEGVKKKEKDLDARLKTVKEKEKALKAEEKK 444
Query: 329 LQKEVDR-LEDE--LVAEKEKYKDIGDD 403
L E +R LED+ L K++ ++IG +
Sbjct: 445 LHMENERLLEDKECLRKLKDEIEEIGTE 472
>At5g61560.1 68418.m07725 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 796
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = +2
Query: 149 KIVELEEELRVVGNNLKSLEVSEEKANQ-------REEEYKNQIKTLTTRLKXXXXXXXX 307
K+ +L + LK+L + EE+A++ R+E+ +N+ + + ++
Sbjct: 326 KMQDLNQRRSEEATRLKNLTIREEEADEVVEMERERQEDAENEAELVRECIERETEERLE 385
Query: 308 XXXSVQKLQKEVDRLEDEL 364
++++KE RLED L
Sbjct: 386 AEARAEEVRKEKQRLEDAL 404
>At5g28490.1 68418.m03466 expressed protein contains Pfam profile
PF04852: Protein of unknown function (DUF640)
Length = 190
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -3
Query: 242 PLRVGWPS-PLRLPEISGCYQRHGAPPQAQRFWIRRTR 132
PLR W S + + Y+ +G PP+A F R R
Sbjct: 93 PLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVR 130
>At5g17870.1 68418.m02095 plastid-specific ribosomal protein-related
contains similarity to plastid-specific ribosomal
protein 6 precursor GI:7578927 from [Spinacia oleracea]
Length = 106
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = -3
Query: 143 RRTRHAPRRAPSQPQPWPAYEQPHRISCRPPQRGTWLP 30
+ T H + P + QPW +P + PP W P
Sbjct: 47 KSTAHHRKTRPKKTQPWDIKRKPTVYAPLPPLPAEWSP 84
>At5g07660.1 68418.m00877 structural maintenance of chromosomes
(SMC) family protein similar to SMC-like protein (MIM)
[Arabidopsis thaliana] GI:5880614; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain
Length = 1058
Score = 27.5 bits (58), Expect = 7.9
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +2
Query: 158 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXXSVQKLQK 337
E+EE+ ++ SL+ +E KAN+ + Y+N ++ ++ +++K +
Sbjct: 729 EIEEKESLLEKLQDSLKEAELKANELKASYENLYESAKGEIE-----------ALEKAED 777
Query: 338 EVDRLEDEL---VAEKEKYKDIGDD 403
E+ EDEL EK Y+DI D
Sbjct: 778 ELKEKEDELHSAETEKNHYEDIMKD 802
>At4g30710.2 68417.m04353 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 222 RPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSVPCRNCKRRSIGLKTNLSPKRRNT-RTSE 398
RPT + S + +K + R+ P SP+ P + SI L S +R +T R E
Sbjct: 54 RPTVSSSSQSVAAKRAVSAERKRPSTPPSPTSPSTPIRDLSIDLPA--SSRRLSTGRLPE 111
Query: 399 TIW 407
++W
Sbjct: 112 SLW 114
>At4g30710.1 68417.m04352 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 222 RPTNAKRSTKIRSKPSPPV*RRLKHVPSSPSVPCRNCKRRSIGLKTNLSPKRRNT-RTSE 398
RPT + S + +K + R+ P SP+ P + SI L S +R +T R E
Sbjct: 54 RPTVSSSSQSVAAKRAVSAERKRPSTPPSPTSPSTPIRDLSIDLPA--SSRRLSTGRLPE 111
Query: 399 TIW 407
++W
Sbjct: 112 SLW 114
>At3g60380.1 68416.m06753 expressed protein
Length = 743
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 234 AKRSTKIRSKPSPPV*RRLKHVPSSPSVPCRNCKRRSIGLKTNLSPKR 377
+++S+ S PS P L P SP + + +RRS L T+ +P+R
Sbjct: 331 SRQSSSRSSSPSLPPSPSLSPSPPSPELVPNDTRRRSPELVTDDTPRR 378
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,998,143
Number of Sequences: 28952
Number of extensions: 248158
Number of successful extensions: 1034
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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