Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30823
(805 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0011 - 10569471-10572245 33 0.35
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 31 0.81
06_01_0799 - 5964410-5964565,5964709-5964750,5968762-5968803,596... 31 1.4
09_04_0191 - 15467697-15467975,15468078-15468275,15468308-15468331 30 1.9
06_02_0013 - 10581449-10585105 30 1.9
05_04_0158 + 18613265-18615304 29 4.3
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 29 4.3
11_06_0291 + 22008412-22012284 29 5.7
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 29 5.7
10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535,768... 28 10.0
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 28 10.0
03_06_0155 - 32031370-32031707,32033066-32033279 28 10.0
02_05_0828 + 32057670-32057851,32060054-32060132,32060808-320608... 28 10.0
02_04_0258 + 21339682-21339806,21340635-21340730,21340905-213409... 28 10.0
>06_02_0011 - 10569471-10572245
Length = 924
Score = 32.7 bits (71), Expect = 0.35
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 632 ISLSIRIKPLTIEGLSVDKLRQKAQELWGVHRQTRDR--EYDLEERQK 769
+ L + + L + DKL++ Q+LWGVH + DR + D+E+ +K
Sbjct: 142 VFLYVGVHVLVFMRVIPDKLKEMIQKLWGVHDRQSDRHQDKDVEDARK 189
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 31.5 bits (68), Expect = 0.81
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 442 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLER 621
+I E+R+R + ++ A+L+AMK+ N ++ E N +LE K+QL+
Sbjct: 41 EIAEERERFQLEQRGNDALLEAMKE-ELVAANNELEAAKEEISRKNNELE--SVKKQLQE 97
Query: 622 GE 627
E
Sbjct: 98 SE 99
>06_01_0799 -
5964410-5964565,5964709-5964750,5968762-5968803,
5968903-5968998,5970549-5970630,5973820-5974001
Length = 199
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/64 (29%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = +2
Query: 596 TRPRSSWKEEKKISLSIRIKPLTIEGLSVDKLRQKAQEL-WGVHRQ--TRDREY--DLEE 760
T ++ K +K+ S+ + ++ +EGLSV++L+Q + L G+ R T+D+++ ++ E
Sbjct: 71 THSKNLGKTDKQPSIDLNMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISE 130
Query: 761 RQKK 772
Q+K
Sbjct: 131 LQRK 134
>09_04_0191 - 15467697-15467975,15468078-15468275,15468308-15468331
Length = 166
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 535 NFTIQKKSENFGLSNAQLERNKTKEQLERGEEDLPVHPHQAADHRGSLRRQTPTEGPGTL 714
N I+ + N G + + ++ +++ ERG++D +H H H + Q P GT
Sbjct: 68 NILIEIQDTNQGAATVGGKGDEERDEAERGDDDGVLHVHAVWVHELHVAGQPPQASFGTW 127
Query: 715 G 717
G
Sbjct: 128 G 128
>06_02_0013 - 10581449-10585105
Length = 1218
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 632 ISLSIRIKPLTIEGLSVDKLRQKAQELWGVHRQTR--DREYDLEERQK 769
I L RI P ++ V L QK Q WGVH + R D++ ++EE +K
Sbjct: 208 ILLCTRIFPKWLKE-RVQMLLQKIQAKWGVHEENRSNDQKRNIEEARK 254
>05_04_0158 + 18613265-18615304
Length = 679
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +1
Query: 448 EEKRQRLEEAEKKRQAML-----QAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 612
+EK ++ +E E K Q L +AMK KTG N I+KK ++ + + +++
Sbjct: 608 QEKVEKNQEKEMKIQEKLGEIFDKAMKSEEKTGQNPGIEKKIQDTAEKKQEHDARVVQDK 667
Query: 613 LERGEED 633
+E+ +++
Sbjct: 668 VEKIQDE 674
>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 451 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 612
E+ ++ ++ + AMLQ +KD N +Q+K ++ ++E +TK Q
Sbjct: 1431 EEAKKFQKIKMDLLAMLQRVKDVENLNRNEKMQRKDMEEKIARQRMEIEETKRQ 1484
>11_06_0291 + 22008412-22012284
Length = 1290
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = +1
Query: 448 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLERGE 627
E K + +E + K + + ++ G +K+ + G + ++ N +E+ E E
Sbjct: 471 EVKEEERKEEQNKEKEEREGTEEKQVGGGE---KKEEKEDGDDDGVIDDNYDEEEEEEEE 527
Query: 628 EDLPVHPHQA 657
+D P+H H+A
Sbjct: 528 DDDPIHLHEA 537
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 28.7 bits (61), Expect = 5.7
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Frame = +1
Query: 442 DIEEKRQRLEEAEKKRQAM------LQAMKDASKTGPNFTIQKKSE-NFGLSNAQLERNK 600
++E ++R++E E + A L+ +KD ++ SE + L AQL +
Sbjct: 172 ELESSKERIQEIEAELAASADKLHKLEELKDERSLHAAQEAKRASELDKTLETAQLNMKE 231
Query: 601 TKEQLERGEEDLPVHPHQAADHR 669
+ Q+ +E++ H +A DH+
Sbjct: 232 MEAQISSLQEEIKGHQDKAIDHQ 254
>10_04_0022 +
7687383-7687670,7688479-7688556,7689456-7689535,
7689876-7690095,7690444-7690677
Length = 299
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 445 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLERG 624
+EE R+++EEA++K +A+ Q K+ + IQK+ E+ + R K +E+ +R
Sbjct: 236 LEENRRKVEEAQRK-EALEQQQKELERFLELERIQKQRED------AMRRKKIEEEEDRA 288
Query: 625 EE 630
+
Sbjct: 289 NQ 290
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 701 AQELWGVHRQTRDREYDLEERQKKQDYDLKNSKKD 805
A+E WG H+ +D E++K+++ K + D
Sbjct: 354 AEETWGKHKDAEKAAFDEAEKKKEEEEAAKAGEDD 388
>03_06_0155 - 32031370-32031707,32033066-32033279
Length = 183
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +1
Query: 445 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 615
IEE +QR EEA + +Q + +A K + + + G+ + R K+ E L
Sbjct: 98 IEELKQREEEATQAQQQADVKLLEAKKLASQYQKEADKCSSGMDTCEEAREKSSEAL 154
>02_05_0828 +
32057670-32057851,32060054-32060132,32060808-32060869,
32060993-32061092,32061169-32061210,32062057-32062098,
32062189-32062343,32063609-32063636
Length = 229
Score = 27.9 bits (59), Expect = 10.0
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 8/58 (13%)
Frame = +2
Query: 623 EKKISLSIRIKPLT---IEGLSVDKLRQKAQEL-WGVHR--QTRDREY--DLEERQKK 772
E+ S+R++ + +EGLS+D+L+Q + L G+HR T+D+++ + E Q+K
Sbjct: 98 EQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRK 155
>02_04_0258 +
21339682-21339806,21340635-21340730,21340905-21340980,
21341085-21341143,21341280-21341380,21341447-21341773,
21341861-21342021,21342100-21342303,21342735-21342966,
21343629-21344239
Length = 663
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 608 SSWKEEKKISLSIRIKPLTIEGLSVDKLRQKA 703
SSW +K L +R+ P + EG+ V + + +A
Sbjct: 221 SSWIRSRKFRLGLRVAPGSFEGIRVREAKTEA 252
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.130 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,138,613
Number of Sequences: 37544
Number of extensions: 263825
Number of successful extensions: 835
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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