Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30823
(805 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.051
SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03) 33 0.27
SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) 33 0.27
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 33 0.36
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 32 0.47
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 31 0.83
SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3) 31 1.1
SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 31 1.4
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 29 3.3
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 29 3.3
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_14689| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 29 5.8
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 5.8
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 29 5.8
SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_40403| Best HMM Match : Vicilin_N (HMM E-Value=0.012) 28 7.7
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 35.5 bits (78), Expect = 0.051
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 445 IEEKRQRLEEAEKKRQAMLQAMKDA-SKTGPNFTIQKKSENFGLSNAQLERNKTKEQLER 621
+EE+R+RLE EK+RQA QAM++A K KK+ + ++ KT L R
Sbjct: 319 LEEERKRLENLEKERQAAQQAMQEAHDKLAAAEEAAKKASE--EAKKKVREIKTCSGLAR 376
Query: 622 GEEDLPVHPHQAA--DHRG 672
P+ PH A HRG
Sbjct: 377 -----PIGPHNPAFITHRG 390
>SB_45707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 34.3 bits (75), Expect = 0.12
Identities = 28/98 (28%), Positives = 42/98 (42%)
Frame = +2
Query: 512 KMPARPDPTSPSKRRAKTSV*AMPSWSATRPRSSWKEEKKISLSIRIKPLTIEGLSVDKL 691
K ARP + R+ KTS A RP K + + S R + + +
Sbjct: 426 KQAARPRQARQASRKTKTSKPQDQDKQAARPSCKTKLQDQDKQSSR--QASRKAKTSKTS 483
Query: 692 RQKAQELWGVHRQTRDREYDLEERQKKQDYDLKNSKKD 805
RQ+ Q+ G +R+T+ + + Q KQD K KKD
Sbjct: 484 RQQNQQAPGPYRKTKTSKTSKPQDQDKQDKRDKREKKD 521
>SB_44702| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.03)
Length = 307
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +2
Query: 653 KPL--TIEGLSVDKLRQKAQELWGVHRQTRDREYDLEERQKKQDYDLKNSK 799
KPL T E +D LR++ ++L R+ +DR ++LEE +K L+ S+
Sbjct: 52 KPLIKTPEARELDALREEIRQLRIQLREAKDRGFELEEESRKYKVSLQRSR 102
>SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09)
Length = 787
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +1
Query: 448 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLERGE 627
+ ++ L + EKK Q ML+ K A+K P F ++ +EN G A+ N +++LE +
Sbjct: 607 QRNKEALAKKEKKIQEMLEEEKKATKFEP-FNLE--TENRGSVKAEKWLNSVQQELEEEK 663
Query: 628 EDLPVHPHQA 657
+ + H A
Sbjct: 664 KKVVFKSHSA 673
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 32.7 bits (71), Expect = 0.36
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +1
Query: 445 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLERG 624
+EE+R+R EEAEKKR+ + ++ + + KK E L QLER KE+ ER
Sbjct: 252 MEEERKRKEEAEKKREEEERKRREEEEAAQKW---KKEEL--LRQQQLERE--KEEQERA 304
Query: 625 E 627
E
Sbjct: 305 E 305
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 32.3 bits (70), Expect = 0.47
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +1
Query: 448 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLERGE 627
EE+RQ+ EEA K+R+ L A K++SK+ +K E G + + ++ TK +
Sbjct: 1344 EERRQKREEARKRREEKL-AKKESSKSSNK---RKSKERSGNPSFKRIKSTTKGRETEVT 1399
Query: 628 EDLPV 642
+D PV
Sbjct: 1400 KDSPV 1404
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 31.5 bits (68), Expect = 0.83
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Frame = +2
Query: 512 KMPARPDPTSPSKRRAKTSV*AMPSWSATRPRSSWKEEK-KISLSIRIKPLTIEGLSVDK 688
K ARP S R+ KTS A RP K + + R K G K
Sbjct: 657 KQDARPRQAS---RKTKTSKPQDQDKQAARPSCKTKTSNPQDKQAARPKQARQAGSKTSK 713
Query: 689 L-RQKAQELWGVHRQTRDREYDLEERQKKQDYDLKNSKKD 805
RQ+ Q+ G +R+T+ + + Q KQD K KKD
Sbjct: 714 TSRQQNQQAPGPYRKTKTSKTSKPQDQDKQDKRDKREKKD 753
>SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3)
Length = 1168
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/70 (28%), Positives = 40/70 (57%)
Frame = +1
Query: 442 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLER 621
++EEK++RL+ E+ + ++ +A K+ASK+ + T + +S N ++ Q N+T +
Sbjct: 427 EVEEKKRRLQRYERLQSSLNEAYKEASKSSVDGT-RDESRNEEIT--QTSCNETSGKTPI 483
Query: 622 GEEDLPVHPH 651
EE + H
Sbjct: 484 KEEVINATEH 493
>SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2391
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 498 APGHE--RCQQDRTQLHHPKEERKLRFEQ 578
APGH+ RC QD +L+ K ERK R EQ
Sbjct: 1105 APGHQPLRCLQDVEELYLSKVERKDRLEQ 1133
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 521 ARPDPTSPSKRRAKTSV*AMPSWSATRPRSSWKEEKKIS-LSIRIKPLTIEGLSV 682
ARP P+ +K KT MP S P+SSW IS + + I I G+S+
Sbjct: 290 ARPRPSCKTKPSPKTKT--MPPRSRLEPQSSWNRAVIISTICVAILIAVITGISI 342
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +1
Query: 451 EKRQRLE---EAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER--NKTKEQL 615
+KR R+E E EKK+ + + + + G N QKK+ Q ++ + K +
Sbjct: 193 QKRARIETPEEGEKKKNSRRRQEQKTPEEGKNRKHQKKARTKNTRRGQEQKTPEEGKNKN 252
Query: 616 ERGEEDLPVHPHQAADHRGSLRRQTPTEG 702
+ +E + +H+ R +TP EG
Sbjct: 253 HQKQEQKTPEEGKNKNHQKRARIETPEEG 281
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 448 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERN-KTKEQLERG 624
E++RQR E+ ++ + +Q +KD + I ++ E Q E+ K ++L+
Sbjct: 440 EDERQRAEDERQRVKHEMQRLKDERRRAEEDEIARQEEELRRLQEQREKELKRYKELQMA 499
Query: 625 EED 633
EE+
Sbjct: 500 EEE 502
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Frame = +2
Query: 581 PSWSATRPRSSWKEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWGVHRQ---------- 730
P WS PR S + S S R+ L+ E ++ + +K Q+ W R+
Sbjct: 436 PRWSDDEPRKSRMHVRSSSASDRLTMLSRE-RTLQEEAEKWQQAWKDERRRNDKLISDIA 494
Query: 731 TRDREYDLEERQKKQDYD 784
R+R++ E + +QDY+
Sbjct: 495 VRERDWSRAEERMRQDYE 512
>SB_14689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1900
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +2
Query: 683 DKLRQKAQELWGVHRQTRDREYDLEERQKKQDYDLKNSKK 802
+KL ++A E+ +H ++ ++ER++K+D + K+S K
Sbjct: 1833 EKLDEQATEIEDIHTIIKNIHQMMKEREEKEDKETKSSDK 1872
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/60 (23%), Positives = 31/60 (51%)
Frame = +1
Query: 448 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLERGE 627
EE+R++ EEAE++R+ + K + +QK+ + +L++ + +E+ E
Sbjct: 636 EERRRQQEEAERQRREQEEVFKQQEQQRQQLELQKRQQE-QQRQQELQKRQQEEKQRMAE 694
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +1
Query: 448 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLERGE 627
EE+ ++ EEAE+K+Q L+ + + Q+K E + ER + +++ ER +
Sbjct: 277 EEEEKQKEEAERKKQEKLEKLAKKKEELKERKRQEKLEQ-KAKKKEKERQEREKEKEREK 335
Query: 628 EDLPVHPHQAADHR 669
E + + + R
Sbjct: 336 ERIQQEKEKQKERR 349
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 448 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLERGE 627
++KR+R E+ K+RQ L+ K+ + I+K+ Q ER + KE+ E+ +
Sbjct: 914 KDKREREEKERKRRQQQLE--KEKKEKEKKLLIEKEKRE---KEKQKERLREKEEKEKQK 968
Query: 628 E 630
E
Sbjct: 969 E 969
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 442 DIEEKRQRLEEAEKKRQAMLQAMKD 516
D+EEK + LEEA+ + +A+ MKD
Sbjct: 522 DLEEKAKELEEAKSENEAISGKMKD 546
>SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +1
Query: 448 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE 618
EEKR EEA K+++++ + + + K T +K+ E ++ N+ ++ E
Sbjct: 459 EEKRTESEEAPKRKKSLKRRLSFSRKNKAKKTEEKQDEEGEAREGTMDDNEVSQKPE 515
>SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +1
Query: 178 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRA 297
PA ++EGEG+P+ +R+ Q + ++Q K + +K ++
Sbjct: 56 PANEEEGEGEPKPKRRKAQPSAPKEKQTKSRKRDKKKDKS 95
>SB_40403| Best HMM Match : Vicilin_N (HMM E-Value=0.012)
Length = 1119
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 445 IEEKRQRLEEAEKKRQAMLQ-AMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLER 621
+++KR R EE +++RQ LQ A K + ++Q++ Q + K +E++ +
Sbjct: 661 MQQKRIREEELQRRRQQALQDAEKRKREEEERISLQRQQSESRRFAFQAHKVKLEERVLK 720
Query: 622 GEEDLPVHPHQAADHRGSLRRQTPTEGP 705
ED Q + R S T +E P
Sbjct: 721 SMED-----KQVQESRQSRSSSTSSEEP 743
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.130 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,710,810
Number of Sequences: 59808
Number of extensions: 284004
Number of successful extensions: 952
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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