Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30819
(803 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g11150.1 68417.m01807 vacuolar ATP synthase subunit E / V-ATP... 126 1e-29
At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putati... 117 1e-26
At1g64200.1 68414.m07273 vacuolar ATP synthase subunit E, putati... 113 1e-25
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 31 1.2
At5g26680.1 68418.m03171 endonuclease, putative similar to Swiss... 29 2.7
At5g07670.1 68418.m00878 F-box family protein similar to unknown... 29 4.8
At3g03790.2 68416.m00389 ankyrin repeat family protein / regulat... 29 4.8
At3g03790.1 68416.m00388 ankyrin repeat family protein / regulat... 29 4.8
At5g55600.1 68418.m06932 agenet domain-containing protein / brom... 28 6.3
At5g55540.1 68418.m06919 expressed protein 28 6.3
At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR ... 28 8.3
At3g07610.1 68416.m00911 transcription factor jumonji (jmjC) dom... 28 8.3
At2g41990.1 68415.m05194 expressed protein 28 8.3
At2g02180.1 68415.m00154 tobamovirus multiplication protein 3 (T... 28 8.3
>At4g11150.1 68417.m01807 vacuolar ATP synthase subunit E / V-ATPase
E subunit / vacuolar proton pump E subunit (VATE)
identical to SP|Q39258 Vacuolar ATP synthase subunit E
(EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump
E subunit) {Arabidopsis thaliana}
Length = 230
Score = 126 bits (305), Expect = 1e-29
Identities = 81/227 (35%), Positives = 119/227 (52%), Gaps = 11/227 (4%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
++D DV +QI+ M+ FI Q FNIEK +LV+ ++ KI
Sbjct: 1 MNDGDVSRQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQDYEKKEK 60
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
I S LN +R+KVL+ ++D V + D+A K L V +D Y +LL LIVQ
Sbjct: 61 QADVRKKIDYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLKDLIVQ 120
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDV-VLKVDTENFLSPDT---- 591
L +L EP+V +R R+ D LVE++L A+ +Y K K + VDT+ FL P
Sbjct: 121 CLLRLKEPSVLLRCREEDLGLVEAVLDDAKEEYAGKAKVHAPEVAVDTKIFLPPPPKSND 180
Query: 592 -----C-GGIELVAARGRIKISNTLESRLELIAQQLLPEIRNALFGR 714
C GG+ L + G+I NTL++RL++ + LP IR +LFG+
Sbjct: 181 PHGLHCSGGVVLASRDGKIVCENTLDARLDVAFRMKLPVIRKSLFGQ 227
>At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putative
/ V-ATPase E subunit, putative / vacuolar proton pump E
subunit, putative similar to SP|Q39258 Vacuolar ATP
synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit)
(Vacuolar proton pump E subunit) {Arabidopsis thaliana};
contains Pfam profile PF01991: ATP synthase (E/31 kDa)
subunit
Length = 235
Score = 117 bits (281), Expect = 1e-26
Identities = 74/228 (32%), Positives = 115/228 (50%), Gaps = 13/228 (5%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
++DADV KQI+ M+ FI Q FNIE+ +L++ + K+
Sbjct: 1 MNDADVSKQIQQMVRFIRQEAEEKANEISISAEEEFNIERLQLLESAKRKLRQDYDRKLK 60
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
I S LN +R+K L+ ++D V + D A K L V D Y +LL +LI++
Sbjct: 61 QVDIRKRIDYSTQLNASRIKYLQAQDDVVTAMKDSAAKDLLRVSNDKNNYKKLLKSLIIE 120
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIK-KDVVLKVDTENFL-------- 579
+L +L EP+V +R R+ DK +VES++ A+ Y K K + +D + FL
Sbjct: 121 SLLRLKEPSVLLRCREMDKKVVESVIEDAKRQYAEKAKVGSPKITIDEKVFLPPPPNPKL 180
Query: 580 ----SPDTCGGIELVAARGRIKISNTLESRLELIAQQLLPEIRNALFG 711
P GG+ L + G+I NTL++RL++ +Q LP+IR L G
Sbjct: 181 PDSHDPHCSGGVVLASQDGKIVCENTLDARLDVAFRQKLPQIRTRLVG 228
>At1g64200.1 68414.m07273 vacuolar ATP synthase subunit E, putative
/ V-ATPase E subunit, putative / vacuolar proton pump E
subunit, putative similar to SP|Q39258 Vacuolar ATP
synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit)
(Vacuolar proton pump E subunit) {Arabidopsis thaliana};
contains Pfam profile PF01991: ATP synthase (E/31 kDa)
subunit
Length = 237
Score = 113 bits (273), Expect = 1e-25
Identities = 80/233 (34%), Positives = 115/233 (49%), Gaps = 17/233 (7%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
++DAD QI+ M+ FI Q FNIEK +LV+ ++ KI
Sbjct: 1 MNDADASIQIQQMVRFIRQEAEEKANEISISSEEEFNIEKLQLVEAEKKKIRQEYEKKEK 60
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKL------YSELL 408
I S LN +R+KVL+ ++D V + +EA K+L +V + Y LL
Sbjct: 61 QVDVRKKIDYSMQLNASRIKVLQAQDDIVNAMKEEAAKQLLKVSQHGFFNHHHHQYKHLL 120
Query: 409 VTLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDV-VLKVDTENFLSP 585
LIVQ L +L EP V +R R+ D +VES+L A +Y K K + VD + FL P
Sbjct: 121 KDLIVQCLLRLKEPAVLLRCREEDLDIVESMLDDASEEYCKKAKVHAPEIIVDKDIFLPP 180
Query: 586 ----------DTCGGIELVAARGRIKISNTLESRLELIAQQLLPEIRNALFGR 714
GG+ L + G+I NTL++RLE+ + LPEIR +LFG+
Sbjct: 181 APSDDDPHALSCAGGVVLASRDGKIVCENTLDARLEVAFRNKLPEIRKSLFGK 233
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc finger
ZZ type
Length = 5098
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 378 KGHQTVLRAAGHTYC-AGSLPAHGTHCHHPRPSNRQGSGGVPARKSPN 518
+GH+ V + +C G+ G+ C +P G+G PAR + N
Sbjct: 1613 RGHRVVYSRSSRFFCDCGAGGVRGSSCQCLKPRKYNGNGSAPARGTNN 1660
>At5g26680.1 68418.m03171 endonuclease, putative similar to
Swiss-Prot:P39748 FLAP endonuclease-1 (Maturation factor
1) (MF1) [Homo sapiens]
Length = 453
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 669 DQLQARLQSVADLDTSPGCNQLDSTTGVGRQKVLGVDFQH 550
++LQ + DL GC+ DS G+G Q L + QH
Sbjct: 215 EELQLTMDQFIDLCILSGCDYCDSIRGIGGQTALKLIRQH 254
>At5g07670.1 68418.m00878 F-box family protein similar to unknown
protein (pir||C71419) ; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 476
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 780 LLVPPNLFVFTVELIGEFTVRVASEEGVTYLRQQLLGDQLQAR 652
L+ PPNL + I FTV V S + ++ + LL +L R
Sbjct: 133 LISPPNLGILVNHRIVSFTVGVGSYQSWSFFEENLLSVELVER 175
>At3g03790.2 68416.m00389 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1081
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 9 ALYRPFFVLVVLKISSSHGAQRCRCSETDQAHDG 110
+LY P + +VLK S + A +CR E ++ +G
Sbjct: 508 SLYHPAYAPIVLKKSQTLQADKCREEENEELDEG 541
>At3g03790.1 68416.m00388 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1078
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 9 ALYRPFFVLVVLKISSSHGAQRCRCSETDQAHDG 110
+LY P + +VLK S + A +CR E ++ +G
Sbjct: 505 SLYHPAYAPIVLKKSQTLQADKCREEENEELDEG 538
>At5g55600.1 68418.m06932 agenet domain-containing protein /
bromo-adjacent homology (BAH) domain-containing protein
contains Pfam profile PF01426: BAH domain and PF05641:
Agenet domain
Length = 663
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +1
Query: 448 PTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIELVAARGR 627
P + + SLLG+ +NK KDVV+K D EN LS + + +
Sbjct: 568 PNIVEEAEPEGEKAYNSLLGE-----QNKEHKDVVVKEDDENKLSKEEDKEVGSNETKTY 622
Query: 628 IKISNTLESRLE 663
+ NT+E E
Sbjct: 623 VNHENTVEDHKE 634
>At5g55540.1 68418.m06919 expressed protein
Length = 1380
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 349 RQVHYVRDL-HELSVPSDELGSACSKIGSSSEVQPASPSFHSI 224
R+ H + +L EL VP+DE A + + ++E++ PSF I
Sbjct: 1084 RRYHDLHNLAQELQVPTDENPEADNHVPVTNELEKVDPSFGGI 1126
>At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 874
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 301 LKVLKVREDHVRNVLDEARKRLAEV 375
LK +KV+ED N+LDE ++ L+EV
Sbjct: 54 LKRIKVQEDRGLNLLDEVQQWLSEV 78
>At3g07610.1 68416.m00911 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 1027
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -3
Query: 555 QHNILLDLILVVCLGFSE--QGLHQSLVGLTDADGD 454
QH L D++ V CL F E LH+ G TD D
Sbjct: 558 QHGSLKDVVAVDCLDFCEVKVNLHEFFTGYTDGRYD 593
>At2g41990.1 68415.m05194 expressed protein
Length = 297
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -2
Query: 376 ALQPGACELRQVHYVRDLHELSVPSDELGSACSKIGSSS--EVQPASPSFHS 227
AL P +R ++YV+ V GS CS +GS + SP HS
Sbjct: 16 ALSPPRSAIRPLYYVQSPSNHDVEKMSFGSGCSLMGSPTHPHYYHCSPIHHS 67
>At2g02180.1 68415.m00154 tobamovirus multiplication protein 3
(TOM3) identical to tobamovirus multiplication protein
(TOM3) GI:15425641 from [Arabidopsis thaliana]
Length = 303
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = -3
Query: 381 LWHFSQALASFVKYITYVIFTNFQYLQTSLVQHV 280
++HF + + V+ + +V N Q++Q ++QH+
Sbjct: 85 VFHFLNFVVNGVRAVVFVFRRNVQFMQPEILQHI 118
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,007,502
Number of Sequences: 28952
Number of extensions: 320542
Number of successful extensions: 939
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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