Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30818
         (734 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IJI5 Cluster: Putative uncharacterized protein; n=1; ...    34   4.2  
UniRef50_Q5BZD8 Cluster: SJCHGC04634 protein; n=1; Schistosoma j...    34   4.2  
UniRef50_A5ZWF4 Cluster: Putative uncharacterized protein; n=1; ...    33   9.6  
UniRef50_O96253 Cluster: Putative uncharacterized protein PFB080...    33   9.6  

>UniRef50_Q8IJI5 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 4433

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
 Frame = -3

Query: 678  RSSSYDLDNYTFVRIPIFDY---V*IKCLFPILL--IHFCLCITKNINGILKNITCDYNM 514
            +S+S  L N +    P F Y   + + C F IL+  ++FCLC    IN I++  T D+N 
Sbjct: 2689 QSASSHLSNVSTWNKPFFVYNKKISVNCSFNILIKKLNFCLCSGDKINKIIQINTDDFNF 2748

Query: 513  KYEN 502
              ++
Sbjct: 2749 NVKS 2752


>UniRef50_Q5BZD8 Cluster: SJCHGC04634 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC04634 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 246

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +1

Query: 574 TKMNEENWKQTFNLHIIEYRYANESIVIKVIT 669
           TK N   WKQTF  +I EY   N  I+ +V T
Sbjct: 173 TKTNRPVWKQTFTYNIEEYELNNSVIIFEVFT 204


>UniRef50_A5ZWF4 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus obeum ATCC 29174|Rep: Putative
           uncharacterized protein - Ruminococcus obeum ATCC 29174
          Length = 359

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = -3

Query: 582 HFCLCITKNINGILKNITCDYNMKYENMTTPFNRS*QLCLTNRIVLFY 439
           HF  C+ +  N IL   TCD  +  E+    F  S  LCL+N     Y
Sbjct: 19  HFDFCLLQEDNSILVT-TCDRRLPAESKLEEFRNSTALCLSNATCCLY 65


>UniRef50_O96253 Cluster: Putative uncharacterized protein PFB0800c;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFB0800c - Plasmodium falciparum
            (isolate 3D7)
          Length = 1817

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
 Frame = -3

Query: 558  NING-ILKNITCDYNMKYENMTTPFNRS*QL-CLTNRIVLFYFFSNYSLKAFMK*PLKHT 385
            N+NG +  N    YN+ Y+N+   F +   L C TN + L YF   YSL  F    L + 
Sbjct: 1417 NVNGDVYNNFMYKYNI-YDNIDYIFIKKKNLFCYTNHLSLLYFTYIYSLNKFYYCTLYYN 1475

Query: 384  ----YIYLFLI--IVFMNTILYPQVCTNLSYSFTSF 295
                + Y   I  I F N I+   + T   Y +  F
Sbjct: 1476 ISKCFYYKINIENIHFKNKIILFFIFTQCKYIYIKF 1511


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,577,366
Number of Sequences: 1657284
Number of extensions: 13424128
Number of successful extensions: 26070
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26065
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)