Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30818
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   1.1  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   7.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   7.8  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 336 PQVCTNLSYSFTSFNLGDD 280
           P +CT+L YSF    LGDD
Sbjct: 46  PTLCTHLIYSFV--GLGDD 62


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -3

Query: 237 TFIFCN*SSLLFGTSCTGPLRWA 169
           ++ FC+     F   C+G + WA
Sbjct: 205 SYQFCDNLQYSFDNQCSGTIDWA 227


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 91  GLPTPVAGALMMRIFVG 141
           GL + + G +MM +FVG
Sbjct: 947 GLISAIYGLIMMAVFVG 963


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 91  GLPTPVAGALMMRIFVG 141
           GL + + G +MM +FVG
Sbjct: 947 GLISAIYGLIMMAVFVG 963


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 412 LYEITPETYIHISIFN 365
           +YE T  T++H+++ N
Sbjct: 241 MYEKTNVTFVHLAVLN 256


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -3

Query: 237 TFIFCN*SSLLFGTSCTGPLRWA 169
           ++ FC+     F   C+G + WA
Sbjct: 196 SYQFCDNLQYSFDNQCSGTIDWA 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,472
Number of Sequences: 336
Number of extensions: 4240
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)