Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30815
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    26   0.40 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.69 
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         25   0.92 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   6.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   8.5  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   8.5  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 795 LLSGVMKPFFAFWLW 839
           LL+G+++PF   W+W
Sbjct: 164 LLAGIVQPFLIHWIW 178


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.4 bits (53), Expect = 0.69
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 209 ILFIWLLALCLCV 171
           I+ IWLLALCL V
Sbjct: 175 IIVIWLLALCLAV 187


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -2

Query: 334 QKVKEEEVEA*TS*YPNH*DLSPTVNNYVMCPIVCLSAKRLKFYLSGC-LRCV 179
           ++++EE +E  T    ++  L P  +  V C ++   +K L    S C +RC+
Sbjct: 34  RQIEEENIEPDTELMDSNEPLLPLRHRRVTCDVLSWQSKWLSINHSACAIRCL 86


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -1

Query: 539 PSQRPQRQIRQAHTKEGF---QIRKQIRQAPEEGRRIQLP*PIEGREKEGIHLGRGRQ 375
           P   P++Q +QA   +G     + +Q + AP+      LP P+    +      RGRQ
Sbjct: 219 PGMHPRQQ-QQAQQHQGVVTSPLSQQQQAAPQGAASANLPSPLYPWMRSQFERKRGRQ 275


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 666 PTKILLRGFAKTTMNASLVLKMKNSIWN 583
           P   LL GF ++T + +  ++  N  WN
Sbjct: 21  PINALLLGFVQSTPDNNKTVREFNVYWN 48


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 9/127 (7%)
 Frame = -2

Query: 724 LKGGASSRRGAVNLRTLTTPNEDTIKRVCKDYHERIARLEDEKFDLEYIVKRK------- 566
           +K    S  G++ +      N D  K    DY      + +EK  +E     +       
Sbjct: 400 VKNTLDSYNGSMEINQNIAQNIDHAKNTIIDYRNNDLSINEEKRTIENEQLNRMYKSYPN 459

Query: 565 --DMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFT 392
             D E  D+N +++  R K    T++     +N     + K+  F++    K V+K +  
Sbjct: 460 YIDKETKDMNLEIS-TRPK--SNTVENACVLKNT-EIFKDKSDWFDYSEVSKWVQKGQIC 515

Query: 391 LEEEDKE 371
           L+E++ E
Sbjct: 516 LKEKENE 522


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,213
Number of Sequences: 438
Number of extensions: 3566
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)