Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30811
         (449 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical p...    28   2.7  
Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical pr...    28   2.7  
Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical pr...    28   2.7  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    28   2.7  
AL117202-24|CAD27612.1|  565|Caenorhabditis elegans Hypothetical...    27   6.3  
AL117199-3|CAB55043.3|  868|Caenorhabditis elegans Hypothetical ...    27   8.3  

>Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical
           protein K08E7.5c protein.
          Length = 896

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 268 CLKRSVEEAD*SAHLNIDDMHCI*CLEGSLTSKLSYNYYNM-TILGHL 408
           CL R   + D ++H+ +  M C+ CL     S LS +  +    +GHL
Sbjct: 784 CLGRKKRDTDENSHIRVKRMGCLPCLGRKKRSTLSQSGCSQCNSMGHL 831


>Z77666-9|CAJ43912.1|  541|Caenorhabditis elegans Hypothetical
           protein K08E7.5d protein.
          Length = 541

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 268 CLKRSVEEAD*SAHLNIDDMHCI*CLEGSLTSKLSYNYYNM-TILGHL 408
           CL R   + D ++H+ +  M C+ CL     S LS +  +    +GHL
Sbjct: 429 CLGRKKRDTDENSHIRVKRMGCLPCLGRKKRSTLSQSGCSQCNSMGHL 476


>Z77666-8|CAJ43910.1|  493|Caenorhabditis elegans Hypothetical
           protein K08E7.5b protein.
          Length = 493

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 268 CLKRSVEEAD*SAHLNIDDMHCI*CLEGSLTSKLSYNYYNM-TILGHL 408
           CL R   + D ++H+ +  M C+ CL     S LS +  +    +GHL
Sbjct: 381 CLGRKKRDTDENSHIRVKRMGCLPCLGRKKRSTLSQSGCSQCNSMGHL 428


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
            K08E7.5a protein.
          Length = 1221

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +1

Query: 268  CLKRSVEEAD*SAHLNIDDMHCI*CLEGSLTSKLSYNYYNM-TILGHL 408
            CL R   + D ++H+ +  M C+ CL     S LS +  +    +GHL
Sbjct: 1109 CLGRKKRDTDENSHIRVKRMGCLPCLGRKKRSTLSQSGCSQCNSMGHL 1156


>AL117202-24|CAD27612.1|  565|Caenorhabditis elegans Hypothetical
           protein Y47D3A.30 protein.
          Length = 565

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -1

Query: 152 SLGWSLIPKTSLQ*GVFQVFMTFLFHPN 69
           ++ WSL+P   L  G+F VF+ F F P+
Sbjct: 156 TINWSLLPIHLL--GIFYVFVAFNFRPS 181


>AL117199-3|CAB55043.3|  868|Caenorhabditis elegans Hypothetical
           protein Y43F11A.5 protein.
          Length = 868

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 346 PNIRCNACRLYSDGHFNPPLPHFFSNKIM*LLIFLNPLLK 227
           P  R   C  Y D + NP   ++ +N+ + +L    PLL+
Sbjct: 261 PLFRFQICEEYIDTYENPSSENYLNNRFLRVLAMRIPLLR 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,359,867
Number of Sequences: 27780
Number of extensions: 205529
Number of successful extensions: 330
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)