Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30808
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    64   8e-13
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    44   1e-06
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.7  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 64.5 bits (150), Expect = 8e-13
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
 Frame = +3

Query: 321 TSARDPAFYQLYKRIVQYIIEFKQYQVPYTQEALHFVGLKISDVKVDKMVTFFDHFD-FD 497
           T+ RDP FY+ +  I     E+K     YT+  L++ G+ +S+++V    +  + F+ F 
Sbjct: 392 TAMRDPIFYRWHSYIDDIFQEYKATLPRYTENQLNYPGITVSNIEVQSQGSSKNTFNTFW 451

Query: 498 AFNTVYFSKEELKSSPHG-YKVRQPRLNHKPFT--VTIDIKSDVATNAVVKMFLGPKYDE 668
             + V  S+  +   P G   VR   L H+PFT  +T++ +S+       ++FL PK DE
Sbjct: 452 QQSDVDLSR-GMDFQPRGSVFVRFTHLQHQPFTYKITVNNQSNGNRKGTCRIFLAPKTDE 510

Query: 669 NGFPFSLEDNWMNFYELD 722
            G P+   D  + F ELD
Sbjct: 511 RGNPWLFRDQKIMFIELD 528


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 44.0 bits (99), Expect = 1e-06
 Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 9/140 (6%)
 Frame = +3

Query: 330 RDPAFYQLYKRIVQYIIEFKQYQVPYTQEALHFVGLKISDVKV-------DKMVTFFDHF 488
           RDP F++ +  I     EFK     YT   L++ G+ +++++V       + + TF+   
Sbjct: 395 RDPLFFRWHAYIDDMFQEFKATLPRYTVAQLNYPGVTVTNIEVQAKGGKPNVLSTFWQQS 454

Query: 489 DFDAFNTVYFSKEELKSSPHG-YKVRQPRLNHKPFTVTIDIKSDVATN-AVVKMFLGPKY 662
           D D    + F        P G   VR   L ++ FT  I + +         ++FL P++
Sbjct: 455 DLDLSRGLDF-------QPRGSVFVRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQF 507

Query: 663 DENGFPFSLEDNWMNFYELD 722
           DE G P+   +    F ELD
Sbjct: 508 DERGNPWLFRNQKDMFIELD 527


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 549 GYKVRQPRLNHKPFTVTI 602
           G K   P LNHKP  +TI
Sbjct: 253 GPKQELPDLNHKPLNLTI 270


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 549 GYKVRQPRLNHKPFTVTI 602
           G K   P LNHKP  +TI
Sbjct: 145 GPKQELPDLNHKPLNLTI 162


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +1

Query: 325  RPGTQPSTSSIKGLFNTSSNLNSTRYHTHKKLFTS 429
            +PG +PSTSS +     S    ST  H   K  TS
Sbjct: 1156 KPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTTS 1190


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -1

Query: 554 VTVRRALEFFFTEVDGVEGIEVEMVKECDHFVDFDVGNFQT 432
           VT+     F +T++ G E  ++  V+    +  F VG F +
Sbjct: 408 VTIVTYETFVWTQIMGAEFFKLYAVEYFQMYAQFIVGTFNS 448


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 398 LVLFKFDDVLNNPFIEL 348
           ++   FDD +NN  IEL
Sbjct: 194 MITITFDDAINNNNIEL 210


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 63  DIYEKTFFQYLQQGHFKAFDKEIDLHSSKAVNF 161
           +I +    Q  QQ   +AF K I+  +SKA+ F
Sbjct: 46  EIPQNIIQQQPQQARRRAFVKIIEQPASKALRF 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,466
Number of Sequences: 336
Number of extensions: 2761
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)