Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30808
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 32 0.48
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.63
Z83125-7|CAB05619.1| 407|Caenorhabditis elegans Hypothetical pr... 29 3.4
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 28 5.9
AC006665-2|AAF39904.1| 341|Caenorhabditis elegans Hypothetical ... 28 5.9
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 28 7.8
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 28 7.8
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 82 SSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIYSKKTSSNSTS 225
+++TSS T +PST + + ST TT P S TS+++T+
Sbjct: 586 TTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTT 633
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 82 SSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIYSKKTSSNSTS 225
+++TSS T +PST + + ST TT P S TS+++T+
Sbjct: 586 TTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTT 633
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.63
Identities = 25/70 (35%), Positives = 33/70 (47%)
Frame = +1
Query: 16 TTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIY 195
TTS T TT S+T +S T+++VTS ST +T A+T P
Sbjct: 389 TTSTTF--TTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPST 446
Query: 196 SKKTSSNSTS 225
S T+S STS
Sbjct: 447 STVTTSPSTS 456
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +1
Query: 22 SCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIYSK 201
S T RR + +T ++ ++S T+ P+T + TV +T+ +T T S
Sbjct: 252 SPTLRRMKRDAGDNTC--DYTIESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMST 309
Query: 202 KTSSNSTS 225
TS+ STS
Sbjct: 310 STSTPSTS 317
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.63
Identities = 25/70 (35%), Positives = 33/70 (47%)
Frame = +1
Query: 16 TTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIY 195
TTS T TT S+T +S T+++VTS ST +T A+T P
Sbjct: 389 TTSTTF--TTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPST 446
Query: 196 SKKTSSNSTS 225
S T+S STS
Sbjct: 447 STVTTSPSTS 456
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +1
Query: 22 SCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIYSK 201
S T RR + +T ++ ++S T+ P+T + TV +T+ +T T S
Sbjct: 252 SPTLRRMKRDAGDNTC--DYTIESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMST 309
Query: 202 KTSSNSTS 225
TS+ STS
Sbjct: 310 STSTPSTS 317
>Z83125-7|CAB05619.1| 407|Caenorhabditis elegans Hypothetical
protein T15D6.9 protein.
Length = 407
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 402 PYTQEALHFVGLKISDVKVDKMVTFFDHFDFDAFNTVYFSK 524
P+ + LH GL +S +DK+ ++F+F AFNT + K
Sbjct: 120 PHHKYILH--GLNLSAAYIDKLPRNDENFEFRAFNTSTYPK 158
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 37 RTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWA----TTGRRTPIYSKK 204
R T + SST + SS TSS T++P+T T ST + +T + TP S+
Sbjct: 546 RVTFRPVSSTVVSTKSSTTSS-TTTKPTTLSTTTTTQVPSTTTSVTVPSTQKATPSPSRT 604
Query: 205 TSSNSTS 225
T ++T+
Sbjct: 605 TKKSTTT 611
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 28 TARRTTKKFASSTFMRRHSSNTSSKVTSRPS-TKKLICTVAKQSTLWATTGRRT 186
T R TTK+ ++ + ++ T + RP+ TK + + K++T +TT R T
Sbjct: 292 TTRTTTKRLTTTKATLKTTTKTLPVIPPRPNVTKPITRSTTKRTTTRSTTKRLT 345
>AC006665-2|AAF39904.1| 341|Caenorhabditis elegans Hypothetical
protein H27M09.5 protein.
Length = 341
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 19 TSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGR--RTPI 192
TS + + TKK S ++ S K +++ STKKLI T+ TL + + R P+
Sbjct: 248 TSPSKEKPTKKI-SRNYLADPLS-PGDKKSAKISTKKLISTIKPPKTLSKKSAKSTRNPL 305
Query: 193 YSKKTSSNS 219
S SNS
Sbjct: 306 KSPSKRSNS 314
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 16 TTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIY 195
TT+ + T +ST + + T++ VT+ P+T + + ST T T
Sbjct: 250 TTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTT 309
Query: 196 SKKTSSNSTS 225
+ S+N+TS
Sbjct: 310 TVTYSTNATS 319
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 16 TTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIY 195
TT+ + T +ST + + T++ VT+ P+T + + ST T T
Sbjct: 232 TTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTTTPSTSTHTT 291
Query: 196 SKKTSSNSTS 225
+ S+N+TS
Sbjct: 292 TVTYSTNATS 301
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,206,320
Number of Sequences: 27780
Number of extensions: 279762
Number of successful extensions: 1021
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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