Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30808
(725 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g74800.1 68414.m08666 galactosyltransferase family protein co... 33 0.15
At5g49060.1 68418.m06070 DNAJ heat shock N-terminal domain-conta... 31 0.78
At3g09000.1 68416.m01053 proline-rich family protein 30 1.8
At1g04730.1 68414.m00469 AAA-type ATPase family protein contains... 29 3.1
At2g43760.1 68415.m05440 molybdopterin biosynthesis MoaE family ... 29 4.1
At4g04710.1 68417.m00692 calcium-dependent protein kinase, putat... 28 5.5
At5g64570.1 68418.m08115 glycosyl hydrolase family 3 protein 27 9.6
At5g05480.1 68418.m00590 expressed protein 27 9.6
At4g11380.1 68417.m01835 beta-adaptin, putative strong similarit... 27 9.6
At1g72940.1 68414.m08436 disease resistance protein (TIR-NBS cla... 27 9.6
At1g72920.1 68414.m08434 disease resistance protein (TIR-NBS cla... 27 9.6
At1g69230.2 68414.m07930 expressed protein 27 9.6
At1g69230.1 68414.m07929 expressed protein 27 9.6
>At1g74800.1 68414.m08666 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 672
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -1
Query: 602 NCHSERLVV-KTWLTD-LVTVRRALEFFFTEVDGVEGIEVEMVKECDHFVD 456
N SER+ V K+W+ L+T + + FF + G + + VE+ KE ++F D
Sbjct: 434 NHFSERMAVRKSWMQHVLITSAKVVARFFVALHGRKEVNVELKKEAEYFGD 484
>At5g49060.1 68418.m06070 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|Q9QYI4
DnaJ homolog subfamily B member 12 {Mus musculus};
contains Pfam profile PF00226: DnaJ domain
Length = 354
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 474 FFDHFD-FDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTIDIKSDVATNAVVKMFL 650
F D FD + F TV+ + E+ + H Y+ RQPR + + + S + ++ FL
Sbjct: 189 FDDEFDPEEIFRTVFGQQREVFRASHAYRTRQPRNQFREEEINVAGPSCLTIIQILPFFL 248
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 70 MRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIYSKKTSSNST 222
+RR SS+ SS+ TSRP+T T ST T R + S +S +T
Sbjct: 144 LRRPSSSGSSRSTSRPATPTRRSTTPTTSTSRPVTTRASNSRSSTPTSRAT 194
>At1g04730.1 68414.m00469 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 954
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 82 SSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIYSKKTS 210
+S S + ++P KK+ +AK++ A +RTP+ SK S
Sbjct: 833 ASGGKSGILNKPEIKKINQDLAKKTNAAANESQRTPVTSKPPS 875
>At2g43760.1 68415.m05440 molybdopterin biosynthesis MoaE family
protein contains Pfam profile: PF02391 molybdopterin
converting factor, subunit 2
Length = 198
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 72 EKTFFQYLQQGHFKAFDKEIDLHSSKAVNFVGNYWQTNADLFE-EDFLQFYQRSYEVNAR 248
EK + L++GH K ID S+ + + T D+FE + L+ +Y A
Sbjct: 5 EKNLIEILEEGHKVDVVKYIDYVSAPQAGAIATFSGTTRDMFEGKTVLELRYEAYVPMAT 64
Query: 249 RVLGA 263
R L +
Sbjct: 65 RCLSS 69
>At4g04710.1 68417.m00692 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Nicotiana tabacum] gi|3283996|gb|AAC25423;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 575
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/64 (18%), Positives = 32/64 (50%)
Frame = +3
Query: 417 ALHFVGLKISDVKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTV 596
AL + +S+ ++ + T F++ D D ++ + + ++ + HG K+ + + V
Sbjct: 321 ALKVIAEGLSEEEIKGLKTMFENMDMDKSGSITYEELKMGLNRHGSKLSETEVKQLMEAV 380
Query: 597 TIDI 608
+ D+
Sbjct: 381 SADV 384
>At5g64570.1 68418.m08115 glycosyl hydrolase family 3 protein
Length = 784
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 518 EVDGVEGIEVEMVKECDHFVDFDVGNFQTNEVKSFLCVWYLVLFKFDDVLNNPF 357
E DG + +++ C H+ +DV N++ E SF V + DD PF
Sbjct: 209 ETDGGDSNRLKVAACCKHYTAYDVDNWKGVERYSFNAV--VTQQDMDDTYQPPF 260
>At5g05480.1 68418.m00590 expressed protein
Length = 608
Score = 27.5 bits (58), Expect = 9.6
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = -1
Query: 518 EVDGVEGIEVEMVKECDHFVDFDVGNFQTNEVKSFLCVWYLVLFKFDDVLNNPFIELVEG 339
++DG +E E+ E D +V GN T VKS V LV F+ N + VE
Sbjct: 405 QLDGSFKVEAEVSSEYDGWVRSSKGNL-TTMVKSMFKVDSLVRFE-----KNGTYKRVEQ 458
Query: 338 WVPGRSLVEVKSTRNKCV 285
V +VEV S K V
Sbjct: 459 RVKTERIVEVTSESGKPV 476
>At4g11380.1 68417.m01835 beta-adaptin, putative strong similarity
to SP|Q10567 Adapter-related protein complex 1 beta 1
subunit (Beta-adaptin 1) [Homo sapiens], beta-adaptin
[Drosophila melanogaster] GI:434902; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 894
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +3
Query: 165 GNYWQTNADLFEEDFLQFYQRSYEVNARRVLGAAPKPFNQYTFIPSALDFYQTSARDPA 341
G Q +A L +D FY +E N++ VL FN+ TF +A Q PA
Sbjct: 676 GQGLQISAQLSRKDGQVFYSMLFENNSQSVLDGFMIQFNKNTFGLAAAGSLQIPPLHPA 734
>At1g72940.1 68414.m08436 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 371
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 105 HFKAFDKEIDLHSSKAVNFVG 167
H KA +K++DL+S+K++ VG
Sbjct: 191 HMKALNKKLDLNSNKSLRVVG 211
>At1g72920.1 68414.m08434 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 275
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 105 HFKAFDKEIDLHSSKAVNFVG 167
H KA +K++DL+S+K++ VG
Sbjct: 191 HMKALNKKLDLNSNKSLRVVG 211
>At1g69230.2 68414.m07930 expressed protein
Length = 110
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 55 ASSTFMRRHSSNTSSKVTSRPSTK 126
+++ +MR NT + +T RPSTK
Sbjct: 67 SANNYMRAEGQNTGNFITDRPSTK 90
>At1g69230.1 68414.m07929 expressed protein
Length = 110
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 55 ASSTFMRRHSSNTSSKVTSRPSTK 126
+++ +MR NT + +T RPSTK
Sbjct: 67 SANNYMRAEGQNTGNFITDRPSTK 90
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,309,954
Number of Sequences: 28952
Number of extensions: 257325
Number of successful extensions: 819
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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