Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30807
(774 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0502 + 22771428-22771466,22772327-22772430,22773043-227731... 33 0.19
06_03_0726 + 23904350-23904964,23905986-23906021,23906158-239062... 31 1.0
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 31 1.3
08_02_1528 + 27666356-27667081 29 3.1
05_01_0164 + 1134815-1134911,1135078-1135278,1135875-1136156,113... 29 3.1
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 29 4.1
04_04_0463 - 25397837-25399693,25402136-25402405 29 5.4
03_05_0532 - 25322822-25322932,25323018-25323050,25323187-253232... 26 6.2
08_02_1127 + 24496838-24497590 28 7.2
08_01_0259 + 2123393-2123555,2123670-2124070 28 7.2
06_03_1496 - 30567968-30568210,30568345-30568513,30568635-305687... 28 7.2
11_06_0588 + 25272067-25274850 28 9.5
05_03_0305 - 12005874-12006320 28 9.5
>01_05_0502 + 22771428-22771466,22772327-22772430,22773043-22773129,
22773212-22773287,22773393-22773467,22773639-22773692,
22773745-22773918,22774002-22774061,22774135-22774251,
22774448-22774542,22774811-22775013,22775177-22775274,
22775451-22775587,22776154-22776219,22776300-22776465,
22776537-22776659,22776763-22776845,22776943-22777084,
22777334-22777363,22777587-22777657,22777742-22778333
Length = 863
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/96 (27%), Positives = 41/96 (42%)
Frame = +3
Query: 336 PSTPKRATNQNNVSIIDQPIDVPEIGDGIEWGQQSTESLPTFSVYSGNAQSSMHGAKSLD 515
P+T N I++ +DV GD + STE+ V S + + ++ D
Sbjct: 744 PATSTEDEQLQNAEGIERHLDVSN-GDA----EASTEAAEAAPVSSAPSSDEVQTERTAD 798
Query: 516 SLATSSNVGTSTGQWAEDPFDASSWPADTGPNVHST 623
SS+ G S + DP D+S PA+T + T
Sbjct: 799 EPTGSSDSGNSVSEVLPDPEDSSIDPANTAVSSEQT 834
>06_03_0726 +
23904350-23904964,23905986-23906021,23906158-23906256,
23906445-23906627,23907016-23907105,23907187-23907285,
23907584-23907688,23907786-23907926,23908009-23908296,
23908536-23908826
Length = 648
Score = 31.1 bits (67), Expect = 1.0
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
Frame = +3
Query: 192 KQFNYNKLINDRALLSGMQRCTRDA---YSKSLNQVKEDLLIDLDLPPSTKPSTPKRATN 362
+Q Y + NDRA +S +R T +A + L+ V++ D S S+ +R
Sbjct: 450 RQPRYRRRSNDRARVS--RRLTEEAEQYFEDFLSNVEDTDFSSFDGERSDTSSS-RRDVV 506
Query: 363 QNNVSIIDQPIDVPEIGDGIE-------WGQQSTESLPTFSVYSGNAQSSMHGAKSLDSL 521
QN I+ PI +P++ +E W Q T + + + + GA + +
Sbjct: 507 QNTK--IETPITLPKVASPVEADGVVLPWLQWETSN----DLQTSPCKPKTQGAST--AC 558
Query: 522 ATSSNVGTSTGQWAEDPFDASSWPADT 602
+TSS +S G W+ D+++ DT
Sbjct: 559 STSSRTMSSRGSWSPGDHDSAAGSKDT 585
>08_02_1277 + 25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Frame = +3
Query: 150 STQPSSTRAGNGGSKQFNYNKLIN---DRALLSGMQRCTRDAYSKSLNQVKEDLLIDLDL 320
ST PS++ G+G S + N N D SG+ T + ++ + + +
Sbjct: 1020 STHPSNSNTGDGISDHSDINSSTNFSIDAVKTSGLNSWTPVPVTNTVRSTHSNSISSTSV 1079
Query: 321 PPSTKP-STPKRATNQNNVSIID--QPIDVPEIG 413
P S+ P + P T+Q ID DVP G
Sbjct: 1080 PSSSSPDNNPSMQTSQQEKPSIDIKHGNDVPGSG 1113
>08_02_1528 + 27666356-27667081
Length = 241
Score = 29.5 bits (63), Expect = 3.1
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Frame = +3
Query: 204 YNKLINDRALLSGMQRCTRDAYSKSLNQVKEDLLIDLDLPPSTKPSTPKRATNQNNVSII 383
YN + L S + ++ K++ Q E L+ LDL S + S K T+ + ++
Sbjct: 51 YNNIEEIICLPSSQAQLCQNQQRKAVEQELEHSLVLLDLCNSIQESVSKLKTSIQEMQLV 110
Query: 384 DQPIDVPEIGDGIEWGQQSTESLPTFS--VYSGNAQSSMHGAKSLDSLATSSNVGTS 548
+ D + I++ + T+ + S + +A + G++ + LA + V S
Sbjct: 111 HKRRDATVVQANIQYFIRLTKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAIS 167
>05_01_0164 +
1134815-1134911,1135078-1135278,1135875-1136156,
1136237-1136271,1136356-1136445,1137228-1137357,
1137400-1138004,1138128-1138562
Length = 624
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +3
Query: 291 KEDLLIDLDLPPSTKPSTPKRATNQ---NNVSIIDQPIDVPEIGDGIEWGQQSTESLPTF 461
++DLL+DL PP P P ++ S +D D PE+ ++ +TE P
Sbjct: 12 EDDLLLDLTSPPPLHPDPPHAGCDEVMAAEASRLDPAGDSPEMRRVVD-PDGATEEAPEQ 70
Query: 462 SVYSGNAQSSMHGAKSLDSLATSSNVGTSTG 554
S S + + G SLA S TS G
Sbjct: 71 S-ESPKRRKAKAGVNLRKSLAWDSAFFTSEG 100
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/64 (25%), Positives = 27/64 (42%)
Frame = +3
Query: 99 GDAHESAVVLRKRRTIESTQPSSTRAGNGGSKQFNYNKLINDRALLSGMQRCTRDAYSKS 278
GD + LR+ R+ +P G GG ++ + D + L + +R A S
Sbjct: 57 GDGGNGCISLRRSRSDRQGKPDGGNGGRGGDVILECSRSVWDFSGLQHHMKASRGANGVS 116
Query: 279 LNQV 290
NQ+
Sbjct: 117 KNQI 120
>04_04_0463 - 25397837-25399693,25402136-25402405
Length = 708
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +3
Query: 384 DQPIDVPEIGDGIEWGQQSTESLPTFSVYSGNAQSSMHG--AKSLDSLATSSNVGTSTGQ 557
D+P+ PE+ D + T + T+ +S QSS A + A S+N TG+
Sbjct: 199 DEPLQQPEVFDNLNVRSTKTAEINTYPEFSTIPQSSSKDDFAILIHLKAPSANPDQGTGK 258
Query: 558 WAEDPFDASS 587
A + SS
Sbjct: 259 LANESSAGSS 268
>03_05_0532 -
25322822-25322932,25323018-25323050,25323187-25323222,
25323301-25323336,25323431-25323479,25323671-25323762,
25323899-25323984,25324098-25324261,25325573-25325601,
25325697-25325807,25326471-25326512,25326597-25326647,
25326848-25326898,25327325-25327382,25327823-25327908,
25328008-25328056,25328155-25328273,25328504-25328590,
25328726-25328787,25329222-25329290,25329884-25330133
Length = 556
Score = 26.2 bits (55), Expect(2) = 6.2
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Frame = +3
Query: 180 NGGSKQFNYNKLI--NDRALLS-------GMQRCTRDAYSKSLNQVKEDLLIDLDLPPST 332
N GS ++Y L+ +D AL+ G+ C R+A + NQ + + ++D S
Sbjct: 176 NAGSNAYSYKPLVETSDEALMEVITTNTLGLMICCREAINMMRNQPRGGHIFNIDGAGSD 235
Query: 333 KPSTPKRA 356
TP+ A
Sbjct: 236 GRPTPRFA 243
Score = 20.6 bits (41), Expect(2) = 6.2
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 453 PTFSVYSGNAQSSMHGAKSLDS 518
P F+ Y +S +H KSL +
Sbjct: 240 PRFAAYGATKRSVVHLTKSLQA 261
>08_02_1127 + 24496838-24497590
Length = 250
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +1
Query: 493 CTVLSHSTVSRRHRTWARPLASGRRIPSTRRPGPRTPARMYTRQV 627
C L+ RR W+RP S R S PG RT R R V
Sbjct: 141 CCSLAGGGGCRRPCRWSRPSRSRRPCSSGSAPGVRTATRALARCV 185
>08_01_0259 + 2123393-2123555,2123670-2124070
Length = 187
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/64 (28%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Frame = +1
Query: 475 GTLSRVCTVLSHSTVSRRHRTWARPLASGRRIPSTRRPGPRTPARMYTRQVPSTP-SQCV 651
GT +C H T + PS P PRTP M +P T + V
Sbjct: 98 GTRYFICGFNGHCTGGMKVAVKVEAATGSNPAPSPMTPRPRTPTAMAPNAMPPTAGGRPV 157
Query: 652 PTTN 663
P +N
Sbjct: 158 PPSN 161
>06_03_1496 - 30567968-30568210,30568345-30568513,30568635-30568736,
30569087-30571855,30572402-30572430,30572546-30572659,
30572735-30572846,30574730-30574845,30574928-30575068,
30575121-30575243,30575346-30575478,30575842-30575972,
30576065-30576300,30577073-30577376
Length = 1573
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/103 (19%), Positives = 43/103 (41%)
Frame = +3
Query: 420 IEWGQQSTESLPTFSVYSGNAQSSMHGAKSLDSLATSSNVGTSTGQWAEDPFDASSWPAD 599
++ ++ S + V G +++ + S AT+ +GT+ + + S W
Sbjct: 797 VKCSSEACSSKTSLPVIPGRSRTRLKEISSYSLTATNGVIGTNKNKHSGKYSSTSVWQKV 856
Query: 600 TGPNVHSTSSLNAVPMRSNHELEVNESISMRSRQNESHVYSIN 728
NV +TS + + +V E+I+ ++ N + IN
Sbjct: 857 EKLNVENTSRAGCMVDSAIQNKDVLENINKVAQHNLTRSMKIN 899
>11_06_0588 + 25272067-25274850
Length = 927
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 660 ELEVNESISMRSRQNESHVYSINYVTTRDTDASRL 764
+L+ + + R +N +YS+ Y++ RDTD + L
Sbjct: 584 DLDSCKGLKRRHLKNICGIYSLKYLSLRDTDVTEL 618
>05_03_0305 - 12005874-12006320
Length = 148
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +1
Query: 514 TVSRRHRTWARPLAS---GRRI--PSTRRPGPRTPARMYTRQVPSTPSQCVPTTN*K*MN 678
T R+R W RP+ S +++ P+ ++P + R+ P TP+ P T K +N
Sbjct: 89 TTIPRNRYWRRPVKSPVPAKKLEQPAQKKPSSAPKSMKVWRKKPKTPAPSPPETGGKSVN 148
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,401,319
Number of Sequences: 37544
Number of extensions: 433186
Number of successful extensions: 1711
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1710
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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