Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30807
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    27   0.85 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           26   1.5  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.6  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 26.6 bits (56), Expect = 0.85
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +3

Query: 588 WPADTGPNVHSTSSLNAVPMRSNHELEVNESISMRSRQNESHVYSINYVTTRDTD 752
           W A +  N  ST  L   PM ++  ++ + +++ R    E  V  I+ V  +DT+
Sbjct: 136 WMAKSDRNA-STEKLFVTPMYNSLLIDQSVAMNRRREDQEDFVKKIDMVKVKDTE 189


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = +1

Query: 481  LSRVCTVLSHSTVSRRHRTWARPLASGRRIPSTRRPGPRTPARMYTRQVPSTPSQC 648
            L++   +  ++T    + T  RP   G  + STR  GP+     Y    P+ P  C
Sbjct: 1215 LNKRSAINIYATAGNDYNTPGRPSTLGPSVASTRLDGPQ--HHSYATIGPNCPRNC 1268


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 19/85 (22%), Positives = 38/85 (44%)
 Frame = +3

Query: 492 MHGAKSLDSLATSSNVGTSTGQWAEDPFDASSWPADTGPNVHSTSSLNAVPMRSNHELEV 671
           + G    +S  +SS+  +S+   +   F  SS+ +++G      S +   P R       
Sbjct: 100 LEGQSERESYYSSSHYQSSSSSSSSSSFQQSSYESESGAG----SIVQISPQR------- 148

Query: 672 NESISMRSRQNESHVYSINYVTTRD 746
              +S++ R NE+  +++NY    D
Sbjct: 149 ---VSLKLRLNEAFRFNVNYAQAED 170


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,959
Number of Sequences: 2352
Number of extensions: 15919
Number of successful extensions: 39
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)