Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30807
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   2.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.5  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 309 DLDLPPSTKPSTPKRAT 359
           ++DLPP T+P TP  AT
Sbjct: 289 EVDLPPETQP-TPPSAT 304


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 244  CRGARETPIPKV 279
            CR +R TP+P++
Sbjct: 1333 CRNSRRTPVPRL 1344



 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 601 PARMYTRQVPSTPSQCVPTTN 663
           PA   T   P+TPS  V T+N
Sbjct: 229 PAASATGTGPATPSAVVATSN 249


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,607
Number of Sequences: 438
Number of extensions: 4300
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)