Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30800
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      35   8e-04
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      35   8e-04
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    28   0.094
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   1.5  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   2.0  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   2.7  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.2  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 354 VETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVMLSPL-PHQCLSRSLVLLPT 530
           + +P     L    SPG ++   PS S+ SP+ +  SP ++ SPL PH+      V LP 
Sbjct: 681 ISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFD---VKLPP 737

Query: 531 SP 536
            P
Sbjct: 738 PP 739


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 34.7 bits (76), Expect = 8e-04
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 354 VETPLLFPSLHRAHSPGHLLKVFPSASITSPTRTDTSPLVMLSPL-PHQCLSRSLVLLPT 530
           + +P     L    SPG ++   PS S+ SP+ +  SP ++ SPL PH+      V LP 
Sbjct: 573 ISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFD---VKLPP 629

Query: 531 SP 536
            P
Sbjct: 630 PP 631


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 27.9 bits (59), Expect = 0.094
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 359  NPPAVPVVAQGSFSWTSPEGVPISVNYVADENGYQPTGNAIPTSPPV 499
            +P A+    QGS S  S EGVP+    V   +G    G+    SPPV
Sbjct: 1086 DPVALKSAQQGSSS--SSEGVPLKGTAVPPPSGSSGPGSTGSKSPPV 1130


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 121 IPVQHIPAVRSRDHSYSVSAHPDLLYCPRQSSTQGI 228
           IPV HIP  +  DH      H    +  R++S++GI
Sbjct: 241 IPVGHIPIRQCDDHRDRPPRHFHEEHDTRRASSRGI 276


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 393 HSPGHLLKVFPSASITSPTRTDTSPLVMLSPLPHQ 497
           HSP   + V  S SIT PT+T       L+P P +
Sbjct: 24  HSPQQSIIV--SGSITQPTKTVIQSKRPLAPAPER 56


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = -3

Query: 247 LSAVTLRYLGYYSD---GGNRGDRDGQKRSRSGHGNERPVCAVPVWVLLVEFIF 95
           +  V + +LG  +D   GG  G RDG +    G   +R    +P  V  VE +F
Sbjct: 76  IPGVAVDFLGENNDDSGGGRGGGRDGDRGDGGGEEKKREF-YIPPEVENVEDLF 128


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +3

Query: 465 PLVMLSPLPHQCLSRSLVLLPTSPRTFLSRS 557
           P+V LS     C S  L   PT P T  SR+
Sbjct: 75  PVVSLSTCSMLCGSTQLWPQPTGPVTLASRA 105



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 292 LLLRNQQRYRCPRTGSST*PWWKPPCCSRRC 384
           LL   +Q Y  PR   S  P W   C ++RC
Sbjct: 37  LLYTYRQPY--PRQKKSHPPQWTWQCINQRC 65


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 251 VKFGNEINPDGSYTYFY 301
           +KFG + +P+G Y   Y
Sbjct: 429 IKFGRKADPNGDYIRKY 445


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = -1

Query: 330 SWAAIPLLVS*K*V*EPSGLISFPNLTVSAP*PSDTLGTTLTGAIEEIGM 181
           +W  + LL +   +   + + SF  LT+     +DT+    T AI  +G+
Sbjct: 44  AWTYLILLTTWTVISASTRIKSFKFLTIGVGITTDTIDRVFTVAIPFVGI 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,845
Number of Sequences: 336
Number of extensions: 4458
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)