Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30795
         (829 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    26   0.42 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.2  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    22   6.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +2

Query: 509 VKPTLKKVSKYENKFAKLQ-KKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGD 685
           +K  +KK S++     KL  +K  E    +     +KKE   E++DK+K      G+  D
Sbjct: 196 IKEIVKKHSQFIGYPIKLVVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDED 255

Query: 686 QKVKEEE 706
           +  K+E+
Sbjct: 256 EDTKKED 262



 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +2

Query: 512 KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSK 670
           KP ++ V + E++  K + K  +       K +K+K +T +EE  + KP W++
Sbjct: 244 KPKIEDVGEDEDEDTKKEDKKKK-------KTIKEK-YTEDEELNKTKPIWTR 288


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 659 DWSKGKPGDQKVKEEE 706
           DW KG+  D+++KE E
Sbjct: 233 DWYKGRLTDEQLKELE 248


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 386 DYHERIARLEDEKFDLEYIVKR 451
           DYH    R     F +EY+V R
Sbjct: 835 DYHGAWERQTGHNFTMEYLVSR 856


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 779 PIVGLSAKNLILFSGCL 829
           P +GLSA   ++ +GC+
Sbjct: 22  PKIGLSALGFLIIAGCV 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,141
Number of Sequences: 336
Number of extensions: 2580
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)