Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30794
         (584 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC078655-1|AAH78655.1|  871|Homo sapiens Src homology 3 domain-c...    29   9.1  
AY552599-1|AAS59842.1|  871|Homo sapiens SH3-containing guanine ...    29   9.1  
AF415175-1|AAL27001.1|  871|Homo sapiens putative SH3 domain-con...    29   9.1  
AB073386-1|BAD38637.1|  446|Homo sapiens putative protein produc...    29   9.1  

>BC078655-1|AAH78655.1|  871|Homo sapiens Src homology 3
           domain-containing guanine nucleotide exchange factor
           protein.
          Length = 871

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 487 PRVPCRGTC*WPARRGLPSLRPPRAPVAP 573
           P+ P  G    PA    P LRPPR P AP
Sbjct: 125 PKSPANGAVTLPAPPPPPVLRPPRTPNAP 153


>AY552599-1|AAS59842.1|  871|Homo sapiens SH3-containing guanine
           nucleotide exchange factor protein.
          Length = 871

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 487 PRVPCRGTC*WPARRGLPSLRPPRAPVAP 573
           P+ P  G    PA    P LRPPR P AP
Sbjct: 125 PKSPANGAVTLPAPPPPPVLRPPRTPNAP 153


>AF415175-1|AAL27001.1|  871|Homo sapiens putative SH3
           domain-containing guanine exchange factor SGEF protein.
          Length = 871

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 487 PRVPCRGTC*WPARRGLPSLRPPRAPVAP 573
           P+ P  G    PA    P LRPPR P AP
Sbjct: 125 PKSPANGAVTLPAPPPPPVLRPPRTPNAP 153


>AB073386-1|BAD38637.1|  446|Homo sapiens putative protein product
           of HMFN1864 protein.
          Length = 446

 Score = 29.5 bits (63), Expect = 9.1
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +1

Query: 487 PRVPCRGTC*WPARRGLPSLRPPRAPVAP 573
           P+ P  G    PA    P LRPPR P AP
Sbjct: 125 PKSPANGAVTLPAPPPPPVLRPPRTPNAP 153


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,705,076
Number of Sequences: 237096
Number of extensions: 1425274
Number of successful extensions: 4098
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4098
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)