Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30793
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 30 2.1
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 30 2.1
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 30 2.1
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 30 2.1
Z81458-2|CAB03822.1| 386|Caenorhabditis elegans Hypothetical pr... 29 5.0
U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated p... 28 8.7
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 28 8.7
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 28 8.7
AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucle... 28 8.7
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 28 8.7
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 237 NDEVGVSTTQDSNPFWEKRTKRSVEPN 317
++E+ +TTQ S PFW T + V P+
Sbjct: 649 SEEIATTTTQTSLPFWMTTTNKQVVPD 675
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 237 NDEVGVSTTQDSNPFWEKRTKRSVEPN 317
++E+ +TTQ S PFW T + V P+
Sbjct: 649 SEEIATTTTQTSLPFWMTTTNKQVVPD 675
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 237 NDEVGVSTTQDSNPFWEKRTKRSVEPN 317
++E+ +TTQ S PFW T + V P+
Sbjct: 649 SEEIATTTTQTSLPFWMTTTNKQVVPD 675
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 237 NDEVGVSTTQDSNPFWEKRTKRSVEPN 317
++E+ +TTQ S PFW T + V P+
Sbjct: 649 SEEIATTTTQTSLPFWMTTTNKQVVPD 675
>Z81458-2|CAB03822.1| 386|Caenorhabditis elegans Hypothetical
protein C03E10.3 protein.
Length = 386
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +3
Query: 243 EVGVSTTQDS-NPFWEKRTKRSVEPNRRKTILFINNKVXXXXXXXXXXYSSNEKA*VNVR 419
E+ + T DS WEK K+ ++ N+R +L N V + N++
Sbjct: 287 EMSQTETIDSMKKSWEKHHKKFMKDNKRNKMLSARNPVSCFLLKVIKMF-------FNIQ 339
Query: 420 YS*NPFGSHALLS*RKLDENHVMDSYVFLEFLRSIDL 530
+ F ++ L+ L N + Y++L F+ S L
Sbjct: 340 FREPSFSNNCFLNILYLSSNQITYIYLYLFFVTSFKL 376
>U80436-7|AAC71109.1| 1638|Caenorhabditis elegans Uncoordinated
protein 73, isoform b protein.
Length = 1638
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 240 DEVGVSTTQDSNPFWEKRTKRSVEPNRRKTILF 338
DE+G TQD+ FWE R R+ LF
Sbjct: 1399 DELGPFVTQDTLTFWEPRAYFKGRGKERQVFLF 1431
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 240 DEVGVSTTQDSNPFWEKRTKRSVEPNRRKTILF 338
DE+G TQD+ FWE R R+ LF
Sbjct: 1399 DELGPFVTQDTLTFWEPRAYFKGRGKERQVFLF 1431
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 240 DEVGVSTTQDSNPFWEKRTKRSVEPNRRKTILF 338
DE+G TQD+ FWE R R+ LF
Sbjct: 1399 DELGPFVTQDTLTFWEPRAYFKGRGKERQVFLF 1431
>AF048835-1|AAC12932.1| 1638|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73B protein.
Length = 1638
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 240 DEVGVSTTQDSNPFWEKRTKRSVEPNRRKTILF 338
DE+G TQD+ FWE R R+ LF
Sbjct: 1399 DELGPFVTQDTLTFWEPRAYFKGRGKERQVFLF 1431
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 240 DEVGVSTTQDSNPFWEKRTKRSVEPNRRKTILF 338
DE+G TQD+ FWE R R+ LF
Sbjct: 1399 DELGPFVTQDTLTFWEPRAYFKGRGKERQVFLF 1431
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,273,391
Number of Sequences: 27780
Number of extensions: 284008
Number of successful extensions: 621
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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