Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30793
         (784 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   4.2  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 677 YKKYHLILMVLSCTKYFYYPDTWV 748
           Y  +H ++ +    KYFY  D W+
Sbjct: 524 YDSHHKLIEIPEDLKYFYEIDNWM 547


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 677 YKKYHLILMVLSCTKYFYYPDTWV 748
           Y  +H ++ +    KYFY  D W+
Sbjct: 524 YDSHHKLIEIPEDLKYFYEIDNWM 547


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 783 KISLSLLLELIPTHVSG**KYF 718
           K +L ++L+L+P H S   K+F
Sbjct: 109 KQNLKVILDLVPNHTSDQHKWF 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,226
Number of Sequences: 438
Number of extensions: 3658
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)