Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30792
(579 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 2e-51
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 196 1e-50
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 195 2e-50
SB_56| Best HMM Match : Actin (HMM E-Value=0) 195 2e-50
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 194 3e-50
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 193 1e-49
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 173 7e-44
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 5e-13
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 64 1e-10
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.008
SB_54| Best HMM Match : Actin (HMM E-Value=0) 32 0.29
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 3.6
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 3.6
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 28 4.8
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 8.4
SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 198 bits (484), Expect = 2e-51
Identities = 91/96 (94%), Positives = 95/96 (98%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLYANTVMSGGTTMYPG+ADRMQKEI+ALAPST+KIKIIAPPERKYSV
Sbjct: 254 NSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSV 313
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 314 WIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 196 bits (478), Expect = 1e-50
Identities = 90/96 (93%), Positives = 94/96 (97%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLYANTV+SGGTTMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSV
Sbjct: 243 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSV 302
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 303 WIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 195 bits (475), Expect = 2e-50
Identities = 89/96 (92%), Positives = 94/96 (97%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSV
Sbjct: 281 NSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSV 340
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 341 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 195 bits (475), Expect = 2e-50
Identities = 89/96 (92%), Positives = 94/96 (97%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSV
Sbjct: 280 NSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSV 339
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 340 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 194 bits (474), Expect = 3e-50
Identities = 89/96 (92%), Positives = 94/96 (97%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLYANTV+SGG+TMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSV
Sbjct: 281 NSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSV 340
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 341 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 193 bits (470), Expect = 1e-49
Identities = 88/96 (91%), Positives = 94/96 (97%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLYANTV+SGG+TM+PGIADRMQKEI+ALAP T+KIKIIAPPERKYSV
Sbjct: 280 NSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSV 339
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 340 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 173 bits (422), Expect = 7e-44
Identities = 78/96 (81%), Positives = 88/96 (91%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
N IMKCDVDIRKDLY+N V+SGG+TM+PGIADRMQKEI LA +++K+K+IAPPERKYSV
Sbjct: 54 NCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSV 113
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWI+KEEY E GP IVHRKCF
Sbjct: 114 WIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 16/112 (14%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITA----------------LAPS 439
N I C +D+R+ LY N V+SGG+TM+ R+Q++I + P
Sbjct: 229 NVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPK 288
Query: 438 TIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
I+ ++I+ ++Y+VW GGS+LAS F + +K +YDE GP I F
Sbjct: 289 PIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Frame = -1
Query: 573 TNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII---APPER 403
T S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P ++++K+I + E+
Sbjct: 157 TTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEK 216
Query: 402 KYSVWIGGSILASL 361
+++ WIGGSILASL
Sbjct: 217 RFNPWIGGSILASL 230
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST-------IK-IKIIA 415
+S++ C +D RK L N V+ GGT M PG R+ +EI L S IK +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 414 PP-ERKYSVWIGGSILASLSTFQQMWISKEEYDE 316
PP + W+GG+I SL ++E Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 52.8 bits (121), Expect = 2e-07
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 29/116 (25%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL------------------- 448
N+I D+D R + Y + V+SGG+TMYPG+ R+++EI L
Sbjct: 284 NTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGMGM 343
Query: 447 --APSTI-----KIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 310
P T K KI I P RK+ V++GG++LA + W++++EY+E G
Sbjct: 344 EQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/28 (50%), Positives = 23/28 (82%)
Frame = -1
Query: 567 SIMKCDVDIRKDLYANTVMSGGTTMYPG 484
+I K D+D+R+ LY+N V+SGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1
Query: 567 SIMKCDVDIRKDLYANTVMSG 505
SI KCD+D+R +L+ N V+SG
Sbjct: 2326 SIKKCDIDLRAELFHNIVLSG 2346
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 484 YRRQDAEGDHRPRALDHQDQDHRSPREE 401
+RRQDA DHR + DH QD PR++
Sbjct: 664 HRRQDA--DHRRQDADHHRQDVVHPRQD 689
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 374 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 511
+DPP+ +Y L+GG ++ ++ FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 522 NTVMSGGTTMYPGIADRMQKEITALAP 442
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = -3
Query: 565 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 392
HHE R P H H P ++ E P DH++++ P +
Sbjct: 321 HHEEEERGVHPPGEHHEEEERGAHPPGQDLEEEERGAHPPGQDHEEEERGAHPPEQHHEE 380
Query: 391 MDRWIHP 371
+R +HP
Sbjct: 381 EERGVHP 387
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 525 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 406
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84
>SB_45720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = -3
Query: 565 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDH--RSPREEVLR 392
HHE R P + H H P ++ E P H++++ P E
Sbjct: 154 HHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPGQHHEEEERGVHPPEEHHEE 213
Query: 391 MDRWIHP 371
+R +HP
Sbjct: 214 EERGVHP 220
>SB_47898| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 490
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = -3
Query: 562 HEVRRRHP*GPVRQHRHVRWYHHVP----RYRRQDAE 464
H R+H P R HR+ R + +P RY R+DA+
Sbjct: 307 HRYTRKHAKIPTRIHRYTRKHAKIPTRIHRYTRKDAK 343
>SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 525 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 406
AN V+ + + +R+ KE+ L +K KIIAPPE
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNHLTELGIVKEKIIAPPE 84
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,484,670
Number of Sequences: 59808
Number of extensions: 312233
Number of successful extensions: 1030
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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