Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30792
(579 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 187 4e-48
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 187 4e-48
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 187 4e-48
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 187 4e-48
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 186 7e-48
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 186 7e-48
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 182 2e-46
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 182 2e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 171 3e-43
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 161 2e-40
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 144 3e-35
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 142 1e-34
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 109 1e-24
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 80 1e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 70 1e-12
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 70 1e-12
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 59 2e-09
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 48 5e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 42 2e-04
At5g43500.2 68418.m05318 expressed protein 41 5e-04
At5g43500.1 68418.m05319 expressed protein 41 5e-04
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 28 5.2
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 6.8
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 27 9.0
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 27 9.0
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 27 9.0
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 187 bits (456), Expect = 4e-48
Identities = 84/96 (87%), Positives = 91/96 (94%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSV
Sbjct: 282 NSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 342 WIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 187 bits (456), Expect = 4e-48
Identities = 84/96 (87%), Positives = 91/96 (94%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSV
Sbjct: 282 NSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 342 WIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 187 bits (456), Expect = 4e-48
Identities = 84/96 (87%), Positives = 91/96 (94%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSV
Sbjct: 282 NSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 342 WIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 187 bits (456), Expect = 4e-48
Identities = 84/96 (87%), Positives = 91/96 (94%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSV
Sbjct: 282 NSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 342 WIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 186 bits (454), Expect = 7e-48
Identities = 84/96 (87%), Positives = 91/96 (94%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSV
Sbjct: 282 NSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 342 WIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 186 bits (454), Expect = 7e-48
Identities = 84/96 (87%), Positives = 91/96 (94%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSV
Sbjct: 282 NSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWISK EYDE+GPGIVHRKCF
Sbjct: 342 WIGGSILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 82/96 (85%), Positives = 89/96 (92%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSV
Sbjct: 282 NSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSV 341
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 342 WIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 82/96 (85%), Positives = 89/96 (92%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLY N V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSV
Sbjct: 282 NSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSV 341
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct: 342 WIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 171 bits (416), Expect = 3e-43
Identities = 76/96 (79%), Positives = 85/96 (88%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLY N V+SGGTTM+PGIADRM KEI ALAP ++KIK++APPERKYSV
Sbjct: 283 NSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSV 342
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
W+GGSILASLS+F MWI+K EYDE G IVHRKCF
Sbjct: 343 WVGGSILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 161 bits (392), Expect = 2e-40
Identities = 72/96 (75%), Positives = 84/96 (87%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCD DIRKDLY N V+SGGTTM+ GI +RM KEI ALA + ++IKI+APPERKYSV
Sbjct: 234 NSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSV 293
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
WIGGSILASLST++QMWI+K EY+E+GP IVH KCF
Sbjct: 294 WIGGSILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 144 bits (350), Expect = 3e-35
Identities = 62/95 (65%), Positives = 78/95 (82%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSI+KC VD R+D+Y N +M+GGTTM GI +RM KE+ AL PS++K+K++ PPE + SV
Sbjct: 271 NSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSV 330
Query: 390 WIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 286
WIGGSILASLSTF QMWI+K+EY+E G IVHRKC
Sbjct: 331 WIGGSILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 142 bits (345), Expect = 1e-34
Identities = 66/80 (82%), Positives = 74/80 (92%)
Frame = -1
Query: 570 NSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSV 391
NSIMKCDVDIRKDLY N V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSV
Sbjct: 282 NSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSV 341
Query: 390 WIGGSILASLSTFQQMWISK 331
WIGGSILASLSTFQQ+ I +
Sbjct: 342 WIGGSILASLSTFQQVKIDQ 361
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 109 bits (263), Expect = 1e-24
Identities = 47/97 (48%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
Frame = -1
Query: 567 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKY 397
SI KCDVDIR++LY++ +++GGT+ + +R++K++ +P + ++K++A ER++
Sbjct: 344 SINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRF 403
Query: 396 SVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKC 286
SVWIGGSILASL +FQQMW SK EY+E G + RKC
Sbjct: 404 SVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 79.8 bits (188), Expect = 1e-15
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Frame = -1
Query: 537 KDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK------YSVWIGGS 376
+ L NTV+ GGTT G R QKE L S I+ ++ PPE YS W+GG+
Sbjct: 274 RQLLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGA 332
Query: 375 ILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
ILA + Q ++K +YDE+GP +VHRKCF
Sbjct: 333 ILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/95 (32%), Positives = 54/95 (56%)
Frame = -1
Query: 567 SIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVW 388
+I C ++ LY + +++GG+T++P + +R++ E+ L P +KI + VW
Sbjct: 326 AINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVW 385
Query: 387 IGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 283
GGS+LAS F+ M ++K EY+E G R+ F
Sbjct: 386 RGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 69.7 bits (163), Expect = 1e-12
Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 12/97 (12%)
Frame = -1
Query: 564 IMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEI------TALAPS-----TIKIKII 418
I + D+D R LY + V+SGG+TMYPG+ R++KEI T L + ++++I
Sbjct: 283 IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIE 342
Query: 417 APPERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 310
PP RK+ V++GG++LA + + WI++E+Y E G
Sbjct: 343 DPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 58.8 bits (136), Expect = 2e-09
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 16/104 (15%)
Frame = -1
Query: 564 IMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTI---------------- 433
I +D R+ LY N V+SGG+TM+ R+Q+++ + + +
Sbjct: 313 IQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPV 372
Query: 432 KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 301
++ +++ P ++++VW GGS+L+S F +KEEY+E G I
Sbjct: 373 EVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/72 (29%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Frame = -1
Query: 528 YANTVMSGGTTMYPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLST 355
+ V++GG+ PG+++R+++E+ PS+I I++I PP + W G ++++LS
Sbjct: 392 FKTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSI 451
Query: 354 FQQMW-ISKEEY 322
F W I+++++
Sbjct: 452 FPGPWCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = -1
Query: 546 DIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILA 367
++ + L ++ +M+GG ++ PG+ +R++ I + P I ++ + W G S A
Sbjct: 632 ELEERLTSSILMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFA 691
Query: 366 SLSTFQQMWISKEEYDESG 310
+ F +K +YDE G
Sbjct: 692 ANLNFLGNAFTKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Frame = -1
Query: 573 TNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII----APP 409
T+SI+ +D+R+ L+++ + GG + G+ +++ + P T I + +
Sbjct: 467 TSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRT 526
Query: 408 ERKYSVWIGGSILASLSTFQQMWISKEEYDESG 310
E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 527 EPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Frame = -1
Query: 573 TNSIMKCD-VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII----APP 409
T+SI+ +D+R+ L+++ + GG + G+ +++ + P T I + +
Sbjct: 479 TSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRT 538
Query: 408 ERKYSVWIGGSILASLSTFQQMWISKEEYDESG 310
E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 539 EPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240: Ubiquitin
family
Length = 1919
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3
Query: 577 VYKLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALD 437
V+K R G QH H+R H PRYR + +P +D
Sbjct: 1386 VFKEKKSARENFVCGACGQHGHMRTNKHCPRYRENT---ESQPEGID 1429
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 472 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 359
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 418
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 209 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 418
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 416 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = -1
Query: 564 IMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYS 394
I++ + KD Y N+ G + +YP ++K+ L ++ K + PP+RK++
Sbjct: 344 ILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPPDRKHA 397
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,538,329
Number of Sequences: 28952
Number of extensions: 201135
Number of successful extensions: 603
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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