Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30787
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0456 + 29521282-29522064 32 0.31
06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890... 31 0.55
03_04_0006 + 16257288-16259522 30 1.3
06_03_0854 + 25400855-25403741,25406174-25407708 29 2.2
06_03_1448 + 30235336-30236763 29 2.9
06_03_1443 + 30182018-30183445 29 2.9
06_03_1440 + 30166515-30167942 29 2.9
06_03_1437 + 30151030-30152457 29 2.9
06_03_1429 + 30100834-30102261 29 2.9
06_03_1425 + 30084383-30085810 29 2.9
06_03_1420 - 30053713-30055140 29 2.9
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 29 2.9
06_03_0400 - 20420257-20421837 28 3.9
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 28 3.9
12_02_0077 - 13288916-13289659,13289689-13289691 28 5.1
04_01_0416 - 5504415-5504590,5509032-5509116,5509190-5509322,550... 28 5.1
01_06_0451 - 29476892-29477516,29477600-29477843,29478313-294787... 28 5.1
06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310... 27 6.8
04_04_0477 + 25517060-25517152,25517263-25517382,25518203-255185... 27 6.8
04_04_1106 - 30948626-30948724,30948841-30949176,30949231-309493... 27 8.9
02_05_0726 - 31252210-31253166,31253667-31253840,31254320-312543... 27 8.9
01_01_1195 - 9567023-9567789,9567871-9568120 27 8.9
>01_06_0456 + 29521282-29522064
Length = 260
Score = 31.9 bits (69), Expect = 0.31
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = -2
Query: 437 AWQC--PRTGSRGSFKRRRAFPPRHHSARLER----NTVRPPILSTA 315
AW+C P +G+RG +RRR P S R R +T+RP + S A
Sbjct: 12 AWRCYSPASGARGGSRRRRRRPAGTTSRRCSRADRLDTLRPYVTSAA 58
>06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,
8905437-8905690,8905785-8908799,8908889-8909001,
8909975-8910164,8910399-8910512,8910591-8910698,
8910941-8911073,8911206-8911408,8911626-8911826
Length = 1889
Score = 31.1 bits (67), Expect = 0.55
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 41 GSQMPRHLISDAHEWINEIPTVPIYYLAKPQPRERAWENQRGKKTLLSL 187
G+ PR + D EW N PT+ ++ + +PRE Q+ K + L
Sbjct: 1393 GNCAPRTVECDEGEWYNNFPTIDENHVQRNKPREEQIFQQKLKPAIFIL 1441
>03_04_0006 + 16257288-16259522
Length = 744
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -2
Query: 248 AKRSP---TYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWE 96
A+RSP Y T L + ARL T PA SP +AV S + G W+
Sbjct: 162 ARRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVASWQGKPGLWD 215
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 248 AKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 123
AKR+PT T P AR +++ +F +P P P +V+S
Sbjct: 475 AKRAPTAVTVGAPPPQARTPAAAPAKAF-VSAPAPAPSSVIS 515
>06_03_1448 + 30235336-30236763
Length = 475
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 442 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 305
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1443 + 30182018-30183445
Length = 475
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 442 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 305
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1440 + 30166515-30167942
Length = 475
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 442 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 305
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1437 + 30151030-30152457
Length = 475
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 442 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 305
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1429 + 30100834-30102261
Length = 475
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 442 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 305
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1425 + 30084383-30085810
Length = 475
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 442 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 305
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1420 - 30053713-30055140
Length = 475
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 442 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 305
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
Length = 640
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 370 TTLHAWNETPCARRYY 323
TT AW ETPCA R++
Sbjct: 560 TTTEAWVETPCAHRFH 575
>06_03_0400 - 20420257-20421837
Length = 526
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 491 LGHLRYSLTDVPPQSNFPAWQCPRTGSRGSF 399
+G L Y ++ P FPA CP G G F
Sbjct: 155 IGELYYGISKASPTLAFPAGVCPTIGVGGHF 185
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 378 RKRSSPFKTPA*SGSRTLPGGEV*LGR-YICQ 470
+KR P K PA S S+ LPG + LG +CQ
Sbjct: 339 KKRGRPRKYPAPSNSKHLPGTDTELGNDSVCQ 370
>12_02_0077 - 13288916-13289659,13289689-13289691
Length = 248
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 191 ESSSTGSSFPADSPKPVPLAVVSLDSR 111
++ S G S P DS + VP+ VV+L R
Sbjct: 3 DNQSLGKSLPKDSRRHVPVGVVALKKR 29
>04_01_0416 -
5504415-5504590,5509032-5509116,5509190-5509322,
5509426-5510312
Length = 426
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2
Query: 221 PLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDS 114
PL+ P AR SSTGSSFP S P ++ L S
Sbjct: 47 PLIHPTPARF-ISSTGSSFPPYSEPPPSAPMLELGS 81
>01_06_0451 -
29476892-29477516,29477600-29477843,29478313-29478714,
29481164-29481358,29481418-29481537,29481615-29481683,
29481901-29481999,29483857-29483946,29484049-29484180,
29485062-29485173
Length = 695
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 509 VLAELALGHLRYSLTDVPPQSNFPAWQCPRTGSR 408
VL EL G + P Q N AW CP SR
Sbjct: 512 VLLELLTGRKPVDILRPPGQENLVAWACPFLTSR 545
>06_01_0437 +
3101449-3101521,3101872-3102232,3103766-3103958,
3104051-3104848,3104997-3105143,3106024-3106377
Length = 641
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 334 GRTVFRSKR--AEW*RGGNARRRLKLPRDPVRGHCQAGK 444
G+T+ R R A W RG A RR +LP G +AG+
Sbjct: 36 GQTLTRGPRTCAVWRRGRAAVRRRRLPAASAEGGAKAGR 74
>04_04_0477 +
25517060-25517152,25517263-25517382,25518203-25518506,
25518944-25519305,25519401-25519575,25520510-25520574,
25520725-25520790,25521275-25521350,25521813-25521922
Length = 456
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 310 RCAVDNIGGRTVFRSKRAEW*RGGNARRRLKLPRDPVRGHCQAGKFD 450
R + + GR + +R + RGG ARR P D RG G++D
Sbjct: 395 RASPIELNGRLIHVEERRQIYRGGGARRGRGRPADFSRGQ-SGGRYD 440
>04_04_1106 -
30948626-30948724,30948841-30949176,30949231-30949353,
30949425-30949517,30949603-30949806,30949884-30950134,
30951011-30952391,30952737-30953174
Length = 974
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -1
Query: 465 RCTAPVKLPRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAP 334
RC P+ LAV + R+ ++ +V P+ +GT P
Sbjct: 97 RCACPICAAELAVDTARLRHYLLSSAAVEGAVPVVPIGTSSPPP 140
>02_05_0726 -
31252210-31253166,31253667-31253840,31254320-31254364,
31254463-31254573,31254669-31254746,31255170-31255234,
31255358-31255733,31256891-31257035,31257308-31257462,
31259036-31259182
Length = 750
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 239 SPTYATPLMSPYNARLESSSTGSSFPADSPKPVP 138
SP Y P ++ N + S +T S P PK P
Sbjct: 159 SPKYVKPAVAKQNGEVVSRATKSDAPVSKPKVDP 192
>01_01_1195 - 9567023-9567789,9567871-9568120
Length = 338
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 206 YNARLESSSTGSSFPADSPKPVPLAVVSL 120
+ R SSS+ S PA +P P P VV+L
Sbjct: 157 FRRRKPSSSSASPAPAPAPPPPPQPVVAL 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,363,836
Number of Sequences: 37544
Number of extensions: 343108
Number of successful extensions: 1201
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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