Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30786
(641 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 37 0.013
At3g29075.1 68416.m03637 glycine-rich protein 35 0.040
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 34 0.092
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 34 0.092
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 33 0.16
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 31 0.49
At3g28770.1 68416.m03591 expressed protein 31 0.49
At1g56660.1 68414.m06516 expressed protein 31 0.65
At5g57830.1 68418.m07232 expressed protein contains Pfam profile... 31 0.86
At3g26050.1 68416.m03244 expressed protein 30 1.1
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 30 1.1
At2g22795.1 68415.m02704 expressed protein 30 1.5
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 30 1.5
At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibit... 29 2.0
At3g05110.1 68416.m00555 hypothetical protein 29 2.0
At5g65180.2 68418.m08199 expressed protein contains Pfam domain,... 29 3.5
At5g65180.1 68418.m08198 expressed protein contains Pfam domain,... 29 3.5
At4g19550.1 68417.m02875 expressed protein 29 3.5
At1g47900.1 68414.m05334 expressed protein 29 3.5
At5g57970.1 68418.m07253 methyladenine glycosylase family protei... 28 4.6
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 28 4.6
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 28 4.6
At5g63640.1 68418.m07990 VHS domain-containing protein / GAT dom... 28 6.1
At2g41170.1 68415.m05085 F-box family protein contains Pfam PF00... 28 6.1
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 28 6.1
At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein ... 28 6.1
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 27 8.0
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 27 8.0
At4g38780.1 68417.m05491 splicing factor, putative strong simila... 27 8.0
At2g31410.1 68415.m03838 expressed protein 27 8.0
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 36.7 bits (81), Expect = 0.013
Identities = 22/90 (24%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +1
Query: 367 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 546
+++A L+ ++ +LE +++K EIS+ SQ+ +L+ + + KV +E+ ++ +
Sbjct: 879 QQVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEII----NKVKVHESILEEINGLS 934
Query: 547 AEFNFRN-QLKVVKKKEFTLEEEDKEKKPD 633
+ R +L+ + K+ L+EE + KK +
Sbjct: 935 EKIKGRELELETLGKQRSELDEELRTKKEE 964
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 35.1 bits (77), Expect = 0.040
Identities = 27/107 (25%), Positives = 56/107 (52%)
Frame = +1
Query: 319 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 498
DD ++ K KDY + DEK + K+KD + NS+ ++ + K K K
Sbjct: 140 DDGDDGHKKHSGKDYDDG-----DEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYK 194
Query: 499 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 639
+ ++ + + +KK ++N ++ K KKK + ++++K+KK +++
Sbjct: 195 EHHD-DDDYDEKKKKKKDYNDDDEKK--KKKHYNDDDDEKKKKHNYN 238
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 33.9 bits (74), Expect = 0.092
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +1
Query: 310 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 489
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 205 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 262
Query: 490 TLKKVSKYENKF 525
LK++S +K+
Sbjct: 263 LLKQLSNMNHKY 274
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 33.9 bits (74), Expect = 0.092
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +1
Query: 310 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 489
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 199 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 256
Query: 490 TLKKVSKYENKF 525
LK++S +K+
Sbjct: 257 LLKQLSNMNHKY 268
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 33.1 bits (72), Expect = 0.16
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Frame = +1
Query: 310 KNIDDANEDTIKRVCKDY--HERIA---RLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 474
K + NE+ ++ ++ H +IA +ED+ LEY VK ++ I L+ ++ D
Sbjct: 228 KKRKEFNEEMKSKITENQKLHTKIAVIDEIEDKSKKLEYQVKEQEDIIQRLSMEIKD--- 284
Query: 475 KFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL--KVVKKKEFTLEEEDKEKKPD 633
K LK+ +KF++ QK ++F ++L +++KK L E+ + K D
Sbjct: 285 --QKKLLKEQKDAIDKFSEDQKLMKRWSFGSKLNTNLLEKKMEELAEDFRMKMED 337
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 31.5 bits (68), Expect = 0.49
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Frame = +1
Query: 328 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS 507
+ED +R ++ HE+I RLE + ++ I ++E+ L Q+N ++ + V
Sbjct: 219 SEDLEQRQKEELHEKIIRLERQIDQVQAI----ELEVEQLKGQLNVMKHMASDGDAQVVK 274
Query: 508 KYENKFAKLQKKAAE---FNFRNQLKVVKKKEFTLEEEDKEKK 627
+ + F L +K AE N NQ +++++ E ++ K+
Sbjct: 275 EVDIIFKDLVEKEAELADLNKFNQTLILRERRTNDELQEARKE 317
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.5 bits (68), Expect = 0.49
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +1
Query: 310 KNIDDANEDTIKRVCKDYHERIARLE-DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 486
+N + ED ++ K H ++ + E D+K E K + EI SQ N++ K K
Sbjct: 1126 QNSNKKKEDKNEKK-KSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKK 1184
Query: 487 PTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKK 627
+ + K E + + ++K + N + +KK+ ++EE K+K+
Sbjct: 1185 SSKDQQKKKEKEMKESEEKKLKKNEED-----RKKQTSVEENKKQKE 1226
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 31.1 bits (67), Expect = 0.65
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Frame = +1
Query: 304 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV 483
K + +++ E K+ K+ E +++K D E +K ++S ++ + GK
Sbjct: 122 KHEELEEEKEGKKKKNKKEKDESGPEEKNKKADKE----KKHEDVSQEKEELEEEDGKKN 177
Query: 484 KPTLKKVSKYENKFAK--LQKKAAEFNFRNQLKVVK-KKEF----TLEEEDKEKKPD 633
K K S E K K +KK E + N+ K VK KKE LE+ED+EKK +
Sbjct: 178 KKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKE 234
>At5g57830.1 68418.m07232 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 387
Score = 30.7 bits (66), Expect = 0.86
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +1
Query: 367 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 546
E++ E E ++ +K+MEI+ L QV R K + + ENKF + +
Sbjct: 78 EKMCHAETSLVLFEDLIYQKEMEIASLEFQVQAYRCKLLSLGCSDPAVIENKFPETLIFS 137
Query: 547 AEFNFRNQLKVVKK 588
E + NQ + +K+
Sbjct: 138 GENSRGNQKRKMKR 151
>At3g26050.1 68416.m03244 expressed protein
Length = 533
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 418 KRKDMEI-SDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 594
KRK++ + S ++ ++++ + + +S + AK ++ F FR+ + K+KE
Sbjct: 355 KRKNISVRSSVSCRISNNEQRKPSVGCENLSTHSRTKAKSLTVSSPFVFRSDERAEKRKE 414
Query: 595 FTLEEEDKEKK 627
F + E+K KK
Sbjct: 415 FFKKVEEKNKK 425
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +1
Query: 400 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE--FNFRNQL 573
DLE + +RK+ E+ ++ + D ++ +LK + +++F L+++A E + RNQ+
Sbjct: 6 DLEGLDQRKE-EMRNIFDDIQDKASLILQFSLKW-EEIDDRFGFLKQRAMEKEVSVRNQI 63
Query: 574 KVVKKKEFTLE-EEDKEKK 627
++KKE L E++E+K
Sbjct: 64 LELEKKEERLRLVEERERK 82
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +1
Query: 322 DANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 498
+ NED +++ + E EDE + E ++ E + ++ N+ + K
Sbjct: 483 EKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDK 542
Query: 499 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKK 627
+ K E + A Q+++ E N+ + +K+E + +EE KEK+
Sbjct: 543 ENEKIEKEEASSQEESKE----NETETKEKEESSSQEETKEKE 581
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 373 IARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT---LKKVSKYENKFAKLQKK 543
++ L K L ++++KD EIS+ NS + K VK T +K ++ A+L +
Sbjct: 117 MSELHKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARS 176
Query: 544 AAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 633
A + +Q K + ++ +E+ K D
Sbjct: 177 QAMCSRLSQEKELTERHAKWLDEELTAKVD 206
>At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibitor
family protein low similarity to SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}, pistil-specific
gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 145
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 304 KPKNIDDANEDTIKRVCKDYHERIARLED 390
K KN++ A EDT+ K+Y + +A+L+D
Sbjct: 53 KQKNLEPALEDTLDDCSKNYLDAVAQLDD 81
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/76 (22%), Positives = 37/76 (48%)
Frame = +1
Query: 400 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 579
DLE I K E S+ + ++ +LK++ EN+ +++ K F+ + +
Sbjct: 35 DLEQIQKEDSSEEICTESERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELE 94
Query: 580 VKKKEFTLEEEDKEKK 627
K+KE L++ +++
Sbjct: 95 EKEKELELKQRQVQER 110
>At5g65180.2 68418.m08199 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 311
Score = 28.7 bits (61), Expect = 3.5
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +1
Query: 319 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 492
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 53 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 110
Query: 493 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEKK 627
LK V + L+++ +E N ++Q++V +E T E ++ +K+
Sbjct: 111 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQKR 159
>At5g65180.1 68418.m08198 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 439
Score = 28.7 bits (61), Expect = 3.5
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +1
Query: 319 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 492
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 181 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 238
Query: 493 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEKK 627
LK V + L+++ +E N ++Q++V +E T E ++ +K+
Sbjct: 239 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQKR 287
>At4g19550.1 68417.m02875 expressed protein
Length = 212
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Frame = +1
Query: 493 LKKVSKYEN--KFAKLQKKAA-----EFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 639
L K+ EN K AKL K E++ +N + + K +++ EEE++ ++PDW+
Sbjct: 119 LDKLFDPENSPKRAKLDKPVVVGDQIEYSKQNSEESLLKSQYSEEEEEEAEEPDWN 174
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +1
Query: 355 KDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV--KPTLKKVSKY-ENKF 525
KD+ E+I +++ + E V++ + ++ DLN +++ + V + +K+ SK E+
Sbjct: 88 KDFEEQIDAYDEKVHEYEEQVQKLNEDVEDLNEKLSVANEEIVTKEALVKQHSKVAEDAV 147
Query: 526 AKLQKKAAE-FNFRNQLKVVKKKEFTLEE 609
+ +K AE +N L+ V + T E+
Sbjct: 148 SGWEKADAEALALKNTLESVTLSKLTAED 176
>At5g57970.1 68418.m07253 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 347
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 257 NVKLLKGGASSRRGAVNLRTLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSL 418
+++ L+ +S R G+ + TPT+ + K T+NA+ +L+ N++L
Sbjct: 40 SLRKLERSSSGRTGSDEKTSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNL 93
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 314 TLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSLKGKIW 433
TLT TK+ G ++ + AS + + + S+WNTS W
Sbjct: 577 TLTPITKLCFAGKSEFLVAASHIPRPELSVWNTSKLSLSW 616
>At1g80070.1 68414.m09373 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2382
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/70 (21%), Positives = 34/70 (48%)
Frame = +1
Query: 400 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 579
DL Y K+ D+ ++ S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1386 DLRYS-KQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1444
Query: 580 VKKKEFTLEE 609
+ + TLE+
Sbjct: 1445 AQNRRLTLED 1454
>At5g63640.1 68418.m07990 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 447
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 493 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 633
L+ V N K + KA+ N + + + LEEED+E++P+
Sbjct: 285 LEPVRPISNGDQKRELKASNANTESSSFISNRAHLKLEEEDEEEEPE 331
>At2g41170.1 68415.m05085 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 27.9 bits (59), Expect = 6.1
Identities = 20/100 (20%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +1
Query: 343 KRVCKDYHERIARLEDEKFDLEYIVKR-KDMEISDLNSQVNDLRGKFVKPTLKKVSKYEN 519
K+ ++ +++ L+ L+ I+++ E+ + S ++LR K V L + E
Sbjct: 47 KKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWE-KHMET 105
Query: 520 KFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 639
K+ +L AA +++ + + + + ++ KP+WS
Sbjct: 106 KWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWS 145
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 415 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 552
+K ++SDL+ Q+N+++GK T K+ + E K L+K AE
Sbjct: 729 LKNMQSQLSDLSHQINEVKGK--ASTYKQ--RLEKKCCDLKKAEAE 770
>At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein
contains tubulin-tyrosine ligase family domain,
Pfam:PF03133
Length = 867
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 334 DTIKRVCKDYHERIARLEDEKFDLEYIV 417
+T ++C+ Y E A + KFDL Y+V
Sbjct: 674 ETGPKICQKYIEHPALFKGNKFDLRYVV 701
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 412 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 588
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 589 KEFTLEEEDKE 621
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 412 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 588
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 589 KEFTLEEEDKE 621
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At4g38780.1 68417.m05491 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2332
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +1
Query: 400 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 579
DL Y + D+ +S S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1338 DLRYS-NQTDVGVSHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1396
Query: 580 VKKKEFTLEE 609
+ + TLE+
Sbjct: 1397 AQNRRLTLED 1406
>At2g31410.1 68415.m03838 expressed protein
Length = 199
Score = 27.5 bits (58), Expect = 8.0
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 411 HR*KERY-GDLRPELPSQRPQRQIRQAHTKEGFQIRKQIRQAPEEGRRIQLP*PIEGREK 587
HR R+ + +P+L + QR+I++A+ + +++++IR E R+ + E R+K
Sbjct: 92 HRSSGRFVKNRKPDLEEMKRQREIKKAYKERVNELKEEIRSNKVEKRKKKE--EREKRKK 149
Query: 588 EGIHLGRGRQREK 626
E + L G + +K
Sbjct: 150 ENV-LRTGTKLQK 161
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.132 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,895,722
Number of Sequences: 28952
Number of extensions: 160191
Number of successful extensions: 678
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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