SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30785
         (739 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060804-1|AAH60804.1|  737|Homo sapiens ADAM metallopeptidase d...    30   7.5  
AY358878-1|AAQ89237.1|  735|Homo sapiens ADAM-12 protein.              30   7.5  
AL589787-6|CAI40683.1|  738|Homo sapiens ADAM metallopeptidase d...    30   7.5  
AL589787-5|CAI40682.1|  909|Homo sapiens ADAM metallopeptidase d...    30   7.5  
AL589787-4|CAI40681.1|  278|Homo sapiens ADAM metallopeptidase d...    30   7.5  
AF023477-1|AAC08703.2|  738|Homo sapiens meltrin-S protein.            30   7.5  
AF023476-1|AAC08702.2|  909|Homo sapiens meltrin-L precursor pro...    30   7.5  

>BC060804-1|AAH60804.1|  737|Homo sapiens ADAM metallopeptidase
           domain 12 (meltrin alpha) protein.
          Length = 737

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 469 VNICDVIDMILVFSSDKYILENLHKLTNKKELLPKK 362
           ++ C  +  ++VF ++ Y+LE +   TN+ +L P K
Sbjct: 132 LSTCSGLRGLIVFENESYVLEPMKSATNRYKLFPAK 167


>AY358878-1|AAQ89237.1|  735|Homo sapiens ADAM-12 protein.
          Length = 735

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 469 VNICDVIDMILVFSSDKYILENLHKLTNKKELLPKK 362
           ++ C  +  ++VF ++ Y+LE +   TN+ +L P K
Sbjct: 132 LSTCSGLRGLIVFENESYVLEPMKSATNRYKLFPAK 167


>AL589787-6|CAI40683.1|  738|Homo sapiens ADAM metallopeptidase
           domain 12 (meltrin alpha) protein.
          Length = 738

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 469 VNICDVIDMILVFSSDKYILENLHKLTNKKELLPKK 362
           ++ C  +  ++VF ++ Y+LE +   TN+ +L P K
Sbjct: 135 LSTCSGLRGLIVFENESYVLEPMKSATNRYKLFPAK 170


>AL589787-5|CAI40682.1|  909|Homo sapiens ADAM metallopeptidase
           domain 12 (meltrin alpha) protein.
          Length = 909

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 469 VNICDVIDMILVFSSDKYILENLHKLTNKKELLPKK 362
           ++ C  +  ++VF ++ Y+LE +   TN+ +L P K
Sbjct: 135 LSTCSGLRGLIVFENESYVLEPMKSATNRYKLFPAK 170


>AL589787-4|CAI40681.1|  278|Homo sapiens ADAM metallopeptidase
           domain 12 (meltrin alpha) protein.
          Length = 278

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 469 VNICDVIDMILVFSSDKYILENLHKLTNKKELLPKK 362
           ++ C  +  ++VF ++ Y+LE +   TN+ +L P K
Sbjct: 132 LSTCSGLRGLIVFENESYVLEPMKSATNRYKLFPAK 167


>AF023477-1|AAC08703.2|  738|Homo sapiens meltrin-S protein.
          Length = 738

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 469 VNICDVIDMILVFSSDKYILENLHKLTNKKELLPKK 362
           ++ C  +  ++VF ++ Y+LE +   TN+ +L P K
Sbjct: 135 LSTCSGLRGLIVFENESYVLEPMKSATNRYKLFPAK 170


>AF023476-1|AAC08702.2|  909|Homo sapiens meltrin-L precursor
           protein.
          Length = 909

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 469 VNICDVIDMILVFSSDKYILENLHKLTNKKELLPKK 362
           ++ C  +  ++VF ++ Y+LE +   TN+ +L P K
Sbjct: 135 LSTCSGLRGLIVFENESYVLEPMKSATNRYKLFPAK 170


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,336,527
Number of Sequences: 237096
Number of extensions: 1713797
Number of successful extensions: 2518
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2518
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -