Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30785
         (739 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL...    31   0.80 
At5g06970.1 68418.m00789 expressed protein                             29   2.4  
At1g22900.1 68414.m02860 disease resistance-responsive family pr...    28   5.6  
At5g02410.1 68418.m00164 DIE2/ALG10 family contains Pfam PF04922...    27   9.8  
At3g22760.1 68416.m02870 CXC domain containing TSO1-like protein...    27   9.8  

>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
           (PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
           (EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
           {Arabidopsis thaliana}; contains Pfam profiles: PF00614
           phospholipase D.active site motif, PF00168 C2 domain
          Length = 1083

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 340 SEEMLYCFFLEATLSYLLVYANFQEYIYHLKRLVSYQSHHKYL 468
           S +M    F + +L  LL++ N   +IYH K L +    HK L
Sbjct: 253 SADMQMTLFGKGSLKVLLLHGNLDIWIYHAKNLPNMDMFHKTL 295


>At5g06970.1 68418.m00789 expressed protein
          Length = 1101

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -1

Query: 427 SDKYILENLHKLTNKKELLPKKNNTAFLQILSQRAPKI*LFNTKHI 290
           SD+    +L  L  + + L KK++T F+ ILSQR P+   F+   I
Sbjct: 595 SDRNNEHHLALLAEETKKLMKKDSTIFMPILSQRHPQAIAFSASLI 640


>At1g22900.1 68414.m02860 disease resistance-responsive family
           protein similar to pathogenesis-related protein [Pisum
           sativum] gi|4585273|gb|AAD25355
          Length = 187

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -2

Query: 192 IFNSLLLVIFSLFQEKPD*KTISCKNKEVHKLLYIHNY 79
           IF+++LL+  ++ Q KP  KT   +  +  KL ++H Y
Sbjct: 13  IFSTVLLLTITVTQSKPYSKTTPFQGNKPDKLTHLHFY 50


>At5g02410.1 68418.m00164 DIE2/ALG10 family contains Pfam PF04922:
           DIE2/ALG10 family
          Length = 509

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -1

Query: 502 WYFSFIRHNEIVNICDVIDMILVFSSDKYILENL 401
           W+F+F+ + ++ ++  V+ M L     +Y+L  L
Sbjct: 139 WFFTFLYYTDVASLTAVLAMYLTCLKRRYVLSAL 172


>At3g22760.1 68416.m02870 CXC domain containing TSO1-like protein 1
           (SOL1) identical to CXC domain containing TSO1-like
           protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427;
           contains Pfam profile PF03638: Tesmin/TSO1-like CXC
           domain; supporting cDNA
           gi|7767426|gb|AF205142.1|AF205142
          Length = 609

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = +2

Query: 149 SWKREKITRSKELKILCICIF*GLYYCLKNVLSYINFTKALNG*IDLYMLSVKKSNFRSP 328
           S KR    +SK LK+ C C   G +YC++       F K ++   D+ + + K+   R+P
Sbjct: 326 SCKRCNCKKSKCLKLYCECFAAG-FYCIEPCSCINCFNKPIHK--DVVLATRKQIESRNP 382

Query: 329 L 331
           L
Sbjct: 383 L 383


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,690,281
Number of Sequences: 28952
Number of extensions: 255628
Number of successful extensions: 491
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)