Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30784
         (652 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_35109| Best HMM Match : DUF1174 (HMM E-Value=6)                     29   3.3  
SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  

>SB_35109| Best HMM Match : DUF1174 (HMM E-Value=6)
          Length = 369

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 285 FILNNGYNNIYD*ITNVFGFTSVM*Y*FCKCNFMNYVKNYLHTTTSMRSK 136
           FI+  GY      IT  +G T+ + Y  C  NFMN ++     T ++ S+
Sbjct: 312 FIITQGYGGTTFIITQGYGGTTGLPYRRCFANFMNCIQKRKTVTVTIFSQ 361


>SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1052

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 151 VNEIEIWACRTNTTKSRRPLDISSVLTFR 65
           + + E+W CR + + SRR L + ++  +R
Sbjct: 72  IGDFELWRCRLSGSSSRRRLQVMAMSGYR 100


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,360,190
Number of Sequences: 59808
Number of extensions: 327326
Number of successful extensions: 512
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)