Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30780
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.9  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   1.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   1.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   1.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 211 ALEDAIEGEKTEQWRAQGQELLIQAKK 291
           AL + +  E T  WR   Q +L+Q ++
Sbjct: 541 ALGEVLWSEPTNTWREAEQRILVQRER 567


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +3

Query: 333 AHVRLH*GEAASGLPAREVERGASSRPEAHGRLDSEQR 446
           AHVR H GE     P  +     SS    H R  S +R
Sbjct: 39  AHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGER 76


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +3

Query: 333 AHVRLH*GEAASGLPAREVERGASSRPEAHGRLDSEQR 446
           AHVR H GE     P  +     SS    H R  S +R
Sbjct: 295 AHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGER 332


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = +3

Query: 285 QEGERAPAARGRLQGEAHVRLH*GEA-ASGLPAREVERGASSRPEAHGRLDSEQRDQGDH 461
           +E ERAPA   R  G+A        A  +G P  +  R A ++      +   Q   G  
Sbjct: 271 EEAERAPAPAVRAAGDAAAARGAARADGAGGPLHD-HRPALAQQRRVAAVQVPQLAGGGR 329

Query: 462 SGPGEA 479
            GPG A
Sbjct: 330 RGPGPA 335


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 361 RRLDYQLEKSNVERRLAQKHMVD 429
           RRL+  LEKS +      +H VD
Sbjct: 148 RRLEMSLEKSGLFSSKTSEHSVD 170


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 154 CPTKRPTLVRISREL 110
           CP  RPT   +S+ L
Sbjct: 734 CPKNRPTFTELSKSL 748


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = -1

Query: 183  PFVLGRFNFLVQPSGQLWSEFHVSYIH 103
            P + G  ++L +     W+E    Y+H
Sbjct: 1179 PLIRGEVHYLNRNEETFWNELIEQYLH 1205


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = -1

Query: 183  PFVLGRFNFLVQPSGQLWSEFHVSYIH 103
            P + G  ++L +     W+E    Y+H
Sbjct: 1179 PLIRGEVHYLNRNEETFWNELIEQYLH 1205


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,789
Number of Sequences: 336
Number of extensions: 3119
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)