Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30779
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    25   0.86 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.86 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    25   0.86 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.1  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +1

Query: 418 KHKADIHEDWTRGKE--EMLQSQDFRQCKLNDIKALKKKHEAFESDLAAHQDRVEQNRGH 591
           K++  + +  T  KE  E  +++  ++ KLND   L+K+ E +ES           +RG 
Sbjct: 46  KYQKAVEKLLTEQKELAEKEEAETLKRYKLND---LEKRREVYESIFKVEVHEALMSRGE 102

Query: 592 R 594
           R
Sbjct: 103 R 103


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +1

Query: 418 KHKADIHEDWTRGKE--EMLQSQDFRQCKLNDIKALKKKHEAFESDLAAHQDRVEQNRGH 591
           K++  + +  T  KE  E  +++  ++ KLND   L+K+ E +ES           +RG 
Sbjct: 206 KYQKAVEKLLTEQKELAEKEEAETLKRYKLND---LEKRREVYESIFKVEVHEALMSRGE 262

Query: 592 R 594
           R
Sbjct: 263 R 263


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +1

Query: 418 KHKADIHEDWTRGKE--EMLQSQDFRQCKLNDIKALKKKHEAFESDLAAHQDRVEQNRGH 591
           K++  + +  T  KE  E  +++  ++ KLND   L+K+ E +ES           +RG 
Sbjct: 206 KYQKAVEKLLTEQKELAEKEEAETLKRYKLND---LEKRREVYESIFKVEVHEALMSRGE 262

Query: 592 R 594
           R
Sbjct: 263 R 263


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 118 RQTDNSLAGCQKKLED 165
           R+TDNSL+   KK +D
Sbjct: 70  RKTDNSLSATSKKDKD 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,046
Number of Sequences: 336
Number of extensions: 3257
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)