Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30779
         (757 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      30   0.020
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.3  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   5.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.4  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 30.3 bits (65), Expect = 0.020
 Identities = 16/63 (25%), Positives = 33/63 (52%)
 Frame = +1

Query: 115 SRQTDNSLAGCQKKLEDYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAYMPTEG 294
           S+ T+ S +     LE  R  +RK K   +E +++ E+N ++ +TK+R  +   +   + 
Sbjct: 194 SQMTEPSSSTKSYVLEGPRNGKRKRKSSTIENESETESNASSTKTKMRRKSGATFEEIQN 253

Query: 295 KMV 303
           + V
Sbjct: 254 QRV 256


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 680 NPVPLRADALTTRVHARPPRGTRG 609
           +P P    A TT + AR P+G++G
Sbjct: 744 SPSPAEQCASTTTITARSPQGSQG 767


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 76  GHWQDVRTLP 47
           GHWQD  +LP
Sbjct: 239 GHWQDQMSLP 248


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 118 RQTDNSLAGCQKKLEDYRTYRRKHKPPRVEQKAKLETN 231
           R  +N  +G  ++ E+ R   RK+  PR+ + A   T+
Sbjct: 547 RSIENYYSGKLERTEEQRIALRKYHAPRLAKLALESTS 584


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 118 RQTDNSLAGCQKKLEDYRTYRRKHKPPRVEQKAKLETN 231
           R  +N  +G  ++ E+ R   RK+  PR+ + A   T+
Sbjct: 585 RSIENYYSGKLERTEEQRIALRKYHAPRLAKLALESTS 622


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,323
Number of Sequences: 438
Number of extensions: 4455
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)