Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30777
(651 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 37 0.013
At3g29075.1 68416.m03637 glycine-rich protein 35 0.041
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 34 0.094
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 34 0.094
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 33 0.16
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 31 0.50
At3g28770.1 68416.m03591 expressed protein 31 0.50
At1g56660.1 68414.m06516 expressed protein 31 0.66
At5g57830.1 68418.m07232 expressed protein contains Pfam profile... 31 0.88
At3g26050.1 68416.m03244 expressed protein 30 1.2
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 30 1.2
At2g22795.1 68415.m02704 expressed protein 30 1.5
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 30 1.5
At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibit... 29 2.0
At3g05110.1 68416.m00555 hypothetical protein 29 2.0
At5g65180.2 68418.m08199 expressed protein contains Pfam domain,... 29 3.5
At5g65180.1 68418.m08198 expressed protein contains Pfam domain,... 29 3.5
At4g19550.1 68417.m02875 expressed protein 29 3.5
At1g47900.1 68414.m05334 expressed protein 29 3.5
At5g57970.1 68418.m07253 methyladenine glycosylase family protei... 28 4.7
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 28 4.7
At1g80070.1 68414.m09373 splicing factor, putative strong simila... 28 4.7
At5g63640.1 68418.m07990 VHS domain-containing protein / GAT dom... 28 6.2
At2g41170.1 68415.m05085 F-box family protein contains Pfam PF00... 28 6.2
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 28 6.2
At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein ... 28 6.2
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 27 8.2
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 27 8.2
At4g38780.1 68417.m05491 splicing factor, putative strong simila... 27 8.2
At2g31410.1 68415.m03838 expressed protein 27 8.2
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 36.7 bits (81), Expect = 0.013
Identities = 22/90 (24%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +2
Query: 377 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 556
+++A L+ ++ +LE +++K EIS+ SQ+ +L+ + + KV +E+ ++ +
Sbjct: 879 QQVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEII----NKVKVHESILEEINGLS 934
Query: 557 AEFNFRN-QLKVVKKKEFTLEEEDKEKKPD 643
+ R +L+ + K+ L+EE + KK +
Sbjct: 935 EKIKGRELELETLGKQRSELDEELRTKKEE 964
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 35.1 bits (77), Expect = 0.041
Identities = 27/107 (25%), Positives = 56/107 (52%)
Frame = +2
Query: 329 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 508
DD ++ K KDY + DEK + K+KD + NS+ ++ + K K K
Sbjct: 140 DDGDDGHKKHSGKDYDDG-----DEKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYK 194
Query: 509 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 649
+ ++ + + +KK ++N ++ K KKK + ++++K+KK +++
Sbjct: 195 EHHD-DDDYDEKKKKKKDYNDDDEKK--KKKHYNDDDDEKKKKHNYN 238
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 33.9 bits (74), Expect = 0.094
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +2
Query: 320 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 499
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 205 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 262
Query: 500 TLKKVSKYENKF 535
LK++S +K+
Sbjct: 263 LLKQLSNMNHKY 274
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 33.9 bits (74), Expect = 0.094
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +2
Query: 320 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 499
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 199 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 256
Query: 500 TLKKVSKYENKF 535
LK++S +K+
Sbjct: 257 LLKQLSNMNHKY 268
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 33.1 bits (72), Expect = 0.16
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Frame = +2
Query: 320 KNIDDANEDTIKRVCKDY--HERIA---RLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 484
K + NE+ ++ ++ H +IA +ED+ LEY VK ++ I L+ ++ D
Sbjct: 228 KKRKEFNEEMKSKITENQKLHTKIAVIDEIEDKSKKLEYQVKEQEDIIQRLSMEIKD--- 284
Query: 485 KFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL--KVVKKKEFTLEEEDKEKKPD 643
K LK+ +KF++ QK ++F ++L +++KK L E+ + K D
Sbjct: 285 --QKKLLKEQKDAIDKFSEDQKLMKRWSFGSKLNTNLLEKKMEELAEDFRMKMED 337
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 31.5 bits (68), Expect = 0.50
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Frame = +2
Query: 338 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS 517
+ED +R ++ HE+I RLE + ++ I ++E+ L Q+N ++ + V
Sbjct: 219 SEDLEQRQKEELHEKIIRLERQIDQVQAI----ELEVEQLKGQLNVMKHMASDGDAQVVK 274
Query: 518 KYENKFAKLQKKAAE---FNFRNQLKVVKKKEFTLEEEDKEKK 637
+ + F L +K AE N NQ +++++ E ++ K+
Sbjct: 275 EVDIIFKDLVEKEAELADLNKFNQTLILRERRTNDELQEARKE 317
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.5 bits (68), Expect = 0.50
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +2
Query: 320 KNIDDANEDTIKRVCKDYHERIARLE-DEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 496
+N + ED ++ K H ++ + E D+K E K + EI SQ N++ K K
Sbjct: 1126 QNSNKKKEDKNEKK-KSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKK 1184
Query: 497 PTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKK 637
+ + K E + + ++K + N + +KK+ ++EE K+K+
Sbjct: 1185 SSKDQQKKKEKEMKESEEKKLKKNEED-----RKKQTSVEENKKQKE 1226
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 31.1 bits (67), Expect = 0.66
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Frame = +2
Query: 314 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV 493
K + +++ E K+ K+ E +++K D E +K ++S ++ + GK
Sbjct: 122 KHEELEEEKEGKKKKNKKEKDESGPEEKNKKADKE----KKHEDVSQEKEELEEEDGKKN 177
Query: 494 KPTLKKVSKYENKFAK--LQKKAAEFNFRNQLKVVK-KKEF----TLEEEDKEKKPD 643
K K S E K K +KK E + N+ K VK KKE LE+ED+EKK +
Sbjct: 178 KKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKE 234
>At5g57830.1 68418.m07232 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 387
Score = 30.7 bits (66), Expect = 0.88
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +2
Query: 377 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 556
E++ E E ++ +K+MEI+ L QV R K + + ENKF + +
Sbjct: 78 EKMCHAETSLVLFEDLIYQKEMEIASLEFQVQAYRCKLLSLGCSDPAVIENKFPETLIFS 137
Query: 557 AEFNFRNQLKVVKK 598
E + NQ + +K+
Sbjct: 138 GENSRGNQKRKMKR 151
>At3g26050.1 68416.m03244 expressed protein
Length = 533
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +2
Query: 428 KRKDMEI-SDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKE 604
KRK++ + S ++ ++++ + + +S + AK ++ F FR+ + K+KE
Sbjct: 355 KRKNISVRSSVSCRISNNEQRKPSVGCENLSTHSRTKAKSLTVSSPFVFRSDERAEKRKE 414
Query: 605 FTLEEEDKEKK 637
F + E+K KK
Sbjct: 415 FFKKVEEKNKK 425
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +2
Query: 410 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE--FNFRNQL 583
DLE + +RK+ E+ ++ + D ++ +LK + +++F L+++A E + RNQ+
Sbjct: 6 DLEGLDQRKE-EMRNIFDDIQDKASLILQFSLKW-EEIDDRFGFLKQRAMEKEVSVRNQI 63
Query: 584 KVVKKKEFTLE-EEDKEKK 637
++KKE L E++E+K
Sbjct: 64 LELEKKEERLRLVEERERK 82
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +2
Query: 332 DANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLK 508
+ NED +++ + E EDE + E ++ E + ++ N+ + K
Sbjct: 483 EKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDK 542
Query: 509 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKK 637
+ K E + A Q+++ E N+ + +K+E + +EE KEK+
Sbjct: 543 ENEKIEKEEASSQEESKE----NETETKEKEESSSQEETKEKE 581
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +2
Query: 383 IARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT---LKKVSKYENKFAKLQKK 553
++ L K L ++++KD EIS+ NS + K VK T +K ++ A+L +
Sbjct: 117 MSELHKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARS 176
Query: 554 AAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 643
A + +Q K + ++ +E+ K D
Sbjct: 177 QAMCSRLSQEKELTERHAKWLDEELTAKVD 206
>At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibitor
family protein low similarity to SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}, pistil-specific
gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 145
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 314 KPKNIDDANEDTIKRVCKDYHERIARLED 400
K KN++ A EDT+ K+Y + +A+L+D
Sbjct: 53 KQKNLEPALEDTLDDCSKNYLDAVAQLDD 81
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/76 (22%), Positives = 37/76 (48%)
Frame = +2
Query: 410 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 589
DLE I K E S+ + ++ +LK++ EN+ +++ K F+ + +
Sbjct: 35 DLEQIQKEDSSEEICTESERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELE 94
Query: 590 VKKKEFTLEEEDKEKK 637
K+KE L++ +++
Sbjct: 95 EKEKELELKQRQVQER 110
>At5g65180.2 68418.m08199 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 311
Score = 28.7 bits (61), Expect = 3.5
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +2
Query: 329 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 502
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 53 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 110
Query: 503 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEKK 637
LK V + L+++ +E N ++Q++V +E T E ++ +K+
Sbjct: 111 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQKR 159
>At5g65180.1 68418.m08198 expressed protein contains Pfam domain,
PF04818: Protein of unknown function, DUF618
Length = 439
Score = 28.7 bits (61), Expect = 3.5
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Frame = +2
Query: 329 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVK--RKDMEISDLNSQVNDLRGKFVKPT 502
+++NE+T CK RI ++E + D K RK+ +L + N LR K
Sbjct: 181 ENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEK-- 238
Query: 503 LKKVSKYENKFAK-----LQKKAAEF-NFRNQLKVVKKKEFTLEEEDKEKK 637
LK V + L+++ +E N ++Q++V +E T E ++ +K+
Sbjct: 239 LKSVEESRTSLVNHLREALREQESELENLQSQIQVA--QEQTEEAQNMQKR 287
>At4g19550.1 68417.m02875 expressed protein
Length = 212
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Frame = +2
Query: 503 LKKVSKYEN--KFAKLQKKAA-----EFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 649
L K+ EN K AKL K E++ +N + + K +++ EEE++ ++PDW+
Sbjct: 119 LDKLFDPENSPKRAKLDKPVVVGDQIEYSKQNSEESLLKSQYSEEEEEEAEEPDWN 174
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +2
Query: 365 KDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV--KPTLKKVSKY-ENKF 535
KD+ E+I +++ + E V++ + ++ DLN +++ + V + +K+ SK E+
Sbjct: 88 KDFEEQIDAYDEKVHEYEEQVQKLNEDVEDLNEKLSVANEEIVTKEALVKQHSKVAEDAV 147
Query: 536 AKLQKKAAE-FNFRNQLKVVKKKEFTLEE 619
+ +K AE +N L+ V + T E+
Sbjct: 148 SGWEKADAEALALKNTLESVTLSKLTAED 176
>At5g57970.1 68418.m07253 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 347
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +3
Query: 267 NVKLLKGGASSRRGAVNLRTLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSL 428
+++ L+ +S R G+ + TPT+ + K T+NA+ +L+ N++L
Sbjct: 40 SLRKLERSSSGRTGSDEKTSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNL 93
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 324 TLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSLKGKIW 443
TLT TK+ G ++ + AS + + + S+WNTS W
Sbjct: 577 TLTPITKLCFAGKSEFLVAASHIPRPELSVWNTSKLSLSW 616
>At1g80070.1 68414.m09373 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2382
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/70 (21%), Positives = 34/70 (48%)
Frame = +2
Query: 410 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 589
DL Y K+ D+ ++ S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1386 DLRYS-KQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1444
Query: 590 VKKKEFTLEE 619
+ + TLE+
Sbjct: 1445 AQNRRLTLED 1454
>At5g63640.1 68418.m07990 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 447
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 503 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPD 643
L+ V N K + KA+ N + + + LEEED+E++P+
Sbjct: 285 LEPVRPISNGDQKRELKASNANTESSSFISNRAHLKLEEEDEEEEPE 331
>At2g41170.1 68415.m05085 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/100 (20%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +2
Query: 353 KRVCKDYHERIARLEDEKFDLEYIVKR-KDMEISDLNSQVNDLRGKFVKPTLKKVSKYEN 529
K+ ++ +++ L+ L+ I+++ E+ + S ++LR K V L + E
Sbjct: 47 KKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWE-KHMET 105
Query: 530 KFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWS 649
K+ +L AA +++ + + + + ++ KP+WS
Sbjct: 106 KWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWS 145
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 425 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 562
+K ++SDL+ Q+N+++GK T K+ + E K L+K AE
Sbjct: 729 LKNMQSQLSDLSHQINEVKGK--ASTYKQ--RLEKKCCDLKKAEAE 770
>At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein
contains tubulin-tyrosine ligase family domain,
Pfam:PF03133
Length = 867
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 344 DTIKRVCKDYHERIARLEDEKFDLEYIV 427
+T ++C+ Y E A + KFDL Y+V
Sbjct: 674 ETGPKICQKYIEHPALFKGNKFDLRYVV 701
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 422 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 598
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 599 KEFTLEEEDKE 631
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 422 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK-FAKLQKKAAEFNFRNQLKVVKK 598
I+ KD E+ ++N L+ +F S Y+ + A LQKK E + +K
Sbjct: 409 ILSTKDAELKGAREEINRLQSEF--------SSYKIRAHALLQKKDMELAAAKDSEQIKS 460
Query: 599 KEFTLEEEDKE 631
E L+E +KE
Sbjct: 461 LEEALKEAEKE 471
>At4g38780.1 68417.m05491 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2332
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +2
Query: 410 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 589
DL Y + D+ +S S ++ + + + + +E++F Q+ AE+ + Q
Sbjct: 1338 DLRYS-NQTDVGVSHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQ 1396
Query: 590 VKKKEFTLEE 619
+ + TLE+
Sbjct: 1397 AQNRRLTLED 1406
>At2g31410.1 68415.m03838 expressed protein
Length = 199
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 421 HR*KERY-GDLRPELPSQRPQRQIRQAHTKEGFQIRKQIRQAPEEGRRIQLP*PIEGREK 597
HR R+ + +P+L + QR+I++A+ + +++++IR E R+ + E R+K
Sbjct: 92 HRSSGRFVKNRKPDLEEMKRQREIKKAYKERVNELKEEIRSNKVEKRKKKE--EREKRKK 149
Query: 598 EGIHLGRGRQREK 636
E + L G + +K
Sbjct: 150 ENV-LRTGTKLQK 161
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,121,398
Number of Sequences: 28952
Number of extensions: 163138
Number of successful extensions: 680
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -