Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30776
(827 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222966-1|BAD96686.1| 364|Homo sapiens PDZ and LIM domain 3 va... 36 0.18
AF039018-1|AAB96665.1| 364|Homo sapiens actinin-associated LIM ... 36 0.18
AF002280-1|AAC16670.1| 364|Homo sapiens alpha-actinin-2 associa... 36 0.18
BC010929-1|AAH10929.1| 283|Homo sapiens LIM domain binding 3 pr... 34 0.55
AJ133767-1|CAB46728.1| 617|Homo sapiens ZASP protein protein. 34 0.55
AJ133766-1|CAB46727.1| 283|Homo sapiens ZASP protein protein. 34 0.55
BX119957-17|CAM25921.1| 433|Homo sapiens chromosome 6 open read... 30 8.9
BC064397-1|AAH64397.1| 433|Homo sapiens C6orf136 protein protein. 30 8.9
AL732442-10|CAI17760.2| 433|Homo sapiens chromosome 6 open read... 30 8.9
AL662800-21|CAI95540.2| 433|Homo sapiens chromosome 6 open read... 30 8.9
AL662798-7|CAI95541.2| 433|Homo sapiens chromosome 6 open readi... 30 8.9
>AK222966-1|BAD96686.1| 364|Homo sapiens PDZ and LIM domain 3
variant protein.
Length = 364
Score = 35.9 bits (79), Expect = 0.18
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 293 KVLHKQFNSPINLYSEQNIANSIRQQTS 376
K++H QFN+P+ LYS+ NI +++ Q S
Sbjct: 184 KIVHAQFNTPMQLYSDDNIMETLQGQVS 211
>AF039018-1|AAB96665.1| 364|Homo sapiens actinin-associated LIM
protein protein.
Length = 364
Score = 35.9 bits (79), Expect = 0.18
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 293 KVLHKQFNSPINLYSEQNIANSIRQQTS 376
K++H QFN+P+ LYS+ NI +++ Q S
Sbjct: 184 KIVHAQFNTPMQLYSDDNIMETLQGQVS 211
>AF002280-1|AAC16670.1| 364|Homo sapiens alpha-actinin-2 associated
LIM protein protein.
Length = 364
Score = 35.9 bits (79), Expect = 0.18
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 293 KVLHKQFNSPINLYSEQNIANSIRQQTS 376
K++H QFN+P+ LYS+ NI +++ Q S
Sbjct: 184 KIVHAQFNTPMQLYSDDNIMETLQGQVS 211
>BC010929-1|AAH10929.1| 283|Homo sapiens LIM domain binding 3
protein.
Length = 283
Score = 34.3 bits (75), Expect = 0.55
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +2
Query: 182 HPNPAMRAPPNHDYRDTLMKQKVAESVLQ-------RVVGEEAPKVLHKQFNSPINLYSE 340
H + +P N DY++ + +S L + +G +A ++H Q+N+PI++YS+
Sbjct: 105 HQKVVVNSPANADYQERFNPSALKDSALSTHKPIEVKGLGGKAT-IIHAQYNTPISMYSQ 163
Query: 341 QNIANSIRQQ 370
I ++I Q
Sbjct: 164 DAIMDAIAGQ 173
>AJ133767-1|CAB46728.1| 617|Homo sapiens ZASP protein protein.
Length = 617
Score = 34.3 bits (75), Expect = 0.55
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +2
Query: 182 HPNPAMRAPPNHDYRDTLMKQKVAESVLQ-------RVVGEEAPKVLHKQFNSPINLYSE 340
H + +P N DY++ + +S L + +G +A ++H Q+N+PI++YS+
Sbjct: 105 HQKVVVNSPANADYQERFNPSALKDSALSTHKPIEVKGLGGKAT-IIHAQYNTPISMYSQ 163
Query: 341 QNIANSIRQQ 370
I ++I Q
Sbjct: 164 DAIMDAIAGQ 173
>AJ133766-1|CAB46727.1| 283|Homo sapiens ZASP protein protein.
Length = 283
Score = 34.3 bits (75), Expect = 0.55
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Frame = +2
Query: 182 HPNPAMRAPPNHDYRDTLMKQKVAESVLQ-------RVVGEEAPKVLHKQFNSPINLYSE 340
H + +P N DY++ + +S L + +G +A ++H Q+N+PI++YS+
Sbjct: 105 HQKVVVNSPANADYQERFNPSALKDSALSTHKPIEVKGLGGKAT-IIHAQYNTPISMYSQ 163
Query: 341 QNIANSIRQQ 370
I ++I Q
Sbjct: 164 DAIMDAIAGQ 173
>BX119957-17|CAM25921.1| 433|Homo sapiens chromosome 6 open reading
frame 136 protein.
Length = 433
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +1
Query: 52 GYQDPKHPEEEVVSNWPYRTTPLVLPGS*GPKGAWPHRELPASSPQPSNEGTS*PRLP 225
G+QD P + S P T + PG+ WPH S P PRLP
Sbjct: 122 GWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLP 179
>BC064397-1|AAH64397.1| 433|Homo sapiens C6orf136 protein protein.
Length = 433
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +1
Query: 52 GYQDPKHPEEEVVSNWPYRTTPLVLPGS*GPKGAWPHRELPASSPQPSNEGTS*PRLP 225
G+QD P + S P T + PG+ WPH S P PRLP
Sbjct: 122 GWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLP 179
>AL732442-10|CAI17760.2| 433|Homo sapiens chromosome 6 open reading
frame 136 protein.
Length = 433
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +1
Query: 52 GYQDPKHPEEEVVSNWPYRTTPLVLPGS*GPKGAWPHRELPASSPQPSNEGTS*PRLP 225
G+QD P + S P T + PG+ WPH S P PRLP
Sbjct: 122 GWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLP 179
>AL662800-21|CAI95540.2| 433|Homo sapiens chromosome 6 open reading
frame 136 protein.
Length = 433
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +1
Query: 52 GYQDPKHPEEEVVSNWPYRTTPLVLPGS*GPKGAWPHRELPASSPQPSNEGTS*PRLP 225
G+QD P + S P T + PG+ WPH S P PRLP
Sbjct: 122 GWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLP 179
>AL662798-7|CAI95541.2| 433|Homo sapiens chromosome 6 open reading
frame 136 protein.
Length = 433
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +1
Query: 52 GYQDPKHPEEEVVSNWPYRTTPLVLPGS*GPKGAWPHRELPASSPQPSNEGTS*PRLP 225
G+QD P + S P T + PG+ WPH S P PRLP
Sbjct: 122 GWQDGHAPSRDGASRTPSGTEDQLYPGTLPFPPLWPHSTTTTSPSSPLFWSPLPPRLP 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,962,449
Number of Sequences: 237096
Number of extensions: 2469319
Number of successful extensions: 6280
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6266
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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