Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30776
(827 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 36 0.035
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 36 0.035
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 35 0.082
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 34 0.11
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 34 0.11
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 34 0.11
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 34 0.11
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical pr... 34 0.14
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 33 0.25
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 31 1.0
AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical ... 29 3.1
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81049-4|CAJ76935.1| 496|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81049-3|CAB02846.2| 631|Caenorhabditis elegans Hypothetical pr... 28 7.1
U88311-4|AAB42344.1| 537|Caenorhabditis elegans Udp-glucuronosy... 28 7.1
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 28 9.4
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 28 9.4
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 28 9.4
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 9.4
AF022975-3|AAB70674.1| 548|Caenorhabditis elegans Hypothetical ... 28 9.4
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 35.9 bits (79), Expect = 0.035
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 296 VLHKQFNSPINLYSEQNIANSIRQQTSPLP 385
V H Q+NSP+NLYS + A + QQT +P
Sbjct: 341 VHHLQYNSPMNLYSSEATAEQLYQQTGAVP 370
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 35.9 bits (79), Expect = 0.035
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 296 VLHKQFNSPINLYSEQNIANSIRQQTSPLP 385
V H Q+NSP+NLYS + A + QQT +P
Sbjct: 341 VHHLQYNSPMNLYSSEATAEQLYQQTGAVP 370
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 34.7 bits (76), Expect = 0.082
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 284 EAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 391
E P+ +H Q+NSP+ LYS++ +QQ P +
Sbjct: 119 EMPQTVHLQYNSPMGLYSKEAAVEQFQQQIGETPND 154
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 281 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 391
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 281 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 391
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 281 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 391
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 62 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 98
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 281 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 391
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 281 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 391
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 281 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 391
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 281 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 391
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 281 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 391
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 62 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 98
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 281 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 391
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 281 EEAPKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 391
E +V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 133 ETDQRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical
protein C54G4.4 protein.
Length = 868
Score = 33.9 bits (74), Expect = 0.14
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = -3
Query: 429 TCLLTTCGRP*WPLVGRGEVCCLIEFAMF-------CSE-YRLIGELNCLCNTLGASSPT 274
TC L CGRP PL+ G V +E + F C + +RLIG + +C G P
Sbjct: 600 TCELVDCGRP--PLIANGRVD--VESSTFESAANYTCHQGFRLIGPESLMCGDRGEWQPA 655
Query: 273 TRCSTDSATFCFIRVS 226
T D AT IR S
Sbjct: 656 TPFCYDIATLQEIRGS 671
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 33.1 bits (72), Expect = 0.25
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 290 PKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 391
P+ +H Q+NSP+ LYS++ +QQ P +
Sbjct: 2 PQTVHLQYNSPMGLYSKEAAVEQFQQQIGETPND 35
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical protein
C05C9.3 protein.
Length = 1225
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +2
Query: 164 ESYLRHHPNPAMRAPPNHDYRDTLMKQKVAESVLQRVVGEEAPKVLHKQFNSP---INLY 334
E ++ +H N R H+ + + KQKV E Q++ + K +Q ++P I +
Sbjct: 1002 EKFMMYHQNLQQRLQYEHEQQMQIQKQKVQEQHHQQIRHHQMLKQEQRQNHNPMHQIEHF 1061
Query: 335 SEQNIANSIR 364
+ + N +R
Sbjct: 1062 QQHQLVNKVR 1071
>AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical
protein Y47D3A.1 protein.
Length = 454
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 274 HSLQHRLCHLLFHKGITVVVVRRCPHCWVGV 182
HS++ ++FHK ++RRCP+C V +
Sbjct: 61 HSIRIEHQTVIFHKPTRCDIIRRCPNCTVNL 91
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 311 FNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHV--VKRQVF 433
F+S N + + +S+ Q PLP HY RPH +K VF
Sbjct: 6 FSSRRNCFPCAPLYSSLLAQCVPLPLQHHYHRPHYESLKSSVF 48
>Z81049-4|CAJ76935.1| 496|Caenorhabditis elegans Hypothetical
protein C48D1.1b protein.
Length = 496
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = +3
Query: 285 RHLRCCTSNSTLQSIYTRNRTLQTLSGSKLRLCQLTAITDGRTLSRGKSFTRNATMQQST 464
+HLR + T ++++RN ++ + K+ L +L + RT G Q S
Sbjct: 85 KHLRVLDVSQTRFNLHSRNNIVEQFTECKMELPELRFMDCTRTSLSGDILECLLKTQLSI 144
Query: 465 HILIDALMLLSIYYAIFRFLQTIYLFHAKLSVSFY 569
+I + Y R L T Y FH + Y
Sbjct: 145 PNIISVTEAETSQYNDVRVLNTAY-FHKSVQALVY 178
>Z81049-3|CAB02846.2| 631|Caenorhabditis elegans Hypothetical
protein C48D1.1a protein.
Length = 631
Score = 28.3 bits (60), Expect = 7.1
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = +3
Query: 285 RHLRCCTSNSTLQSIYTRNRTLQTLSGSKLRLCQLTAITDGRTLSRGKSFTRNATMQQST 464
+HLR + T ++++RN ++ + K+ L +L + RT G Q S
Sbjct: 220 KHLRVLDVSQTRFNLHSRNNIVEQFTECKMELPELRFMDCTRTSLSGDILECLLKTQLSI 279
Query: 465 HILIDALMLLSIYYAIFRFLQTIYLFHAKLSVSFY 569
+I + Y R L T Y FH + Y
Sbjct: 280 PNIISVTEAETSQYNDVRVLNTAY-FHKSVQALVY 313
>U88311-4|AAB42344.1| 537|Caenorhabditis elegans
Udp-glucuronosyltransferase protein28 protein.
Length = 537
Score = 28.3 bits (60), Expect = 7.1
Identities = 27/101 (26%), Positives = 46/101 (45%)
Frame = -2
Query: 460 DCCIVAFLVKDLPLDNVRPSVMAVSWQRRSLLPDRVCNVLFRV*IDWRVELLVQHLRCLF 281
D CI L KDL + V P +S+++ S P+ LF W+ E+ + R +F
Sbjct: 62 DECIGVKLTKDLVI--VEPDEEMMSFKKGST-PNGEIMELF-----WKSEMDSSNSRDMF 113
Query: 280 ANHSLQHRLCHLLFHKGITVVVVRRCPHCWVGVMTQVTLCG 158
+ + +L FHK + + + V ++ VT+CG
Sbjct: 114 SFFNSDMKLACRNFHKRRDIFEQMKSRNFDVAILEPVTICG 154
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 326 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 427
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 326 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 427
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 326 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 427
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 326 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 427
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 326 NLYSEQNIANSIRQQTSPLPTNGHYGRPHVVKRQ 427
N+ S++++ + + P+PT +Y PHV K +
Sbjct: 588 NISSDRDVQSIVGHHYPPMPTVANYDIPHVPKEE 621
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +2
Query: 74 LKKKLSATGRTAPLLSCSRXAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVA 253
LK L +TGRT+P + SR R P S RH+ ++ P + + T+ K +
Sbjct: 196 LKAILQSTGRTSPQTTTSRP----RSRSPRSSESRHNETTSITLPSS--FNSTVRKLTLK 249
Query: 254 ESVLQR 271
E + R
Sbjct: 250 ELMTTR 255
>AF022975-3|AAB70674.1| 548|Caenorhabditis elegans Hypothetical
protein K09C6.8 protein.
Length = 548
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 414 LSRG-KSFTRNATMQQSTHILIDALMLLSIYYAIFRFLQTIYLFHAKLSVSF 566
+S+G K N M ++ + M++ Y A+ ++ QTIY FH + +++F
Sbjct: 60 ISKGTKVMLGNFPMTPKDDVIGNMGMVVCRYLALNQYHQTIYHFHFRAAINF 111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,107,145
Number of Sequences: 27780
Number of extensions: 382650
Number of successful extensions: 1163
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -